RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W SAC7P17121 654 aa9.29□□□□□ -0.92
SHH4YLR164W THR1P17423 357 aaKnown RBP9.29□□□□□ -0.92
SHH4YLR164W YJU2P28320 278 aaPredicted RBP9.29□□□□□ -0.92
SHH4YLR164W SPC42P36094 363 aa9.29□□□□□ -0.92
SHH4YLR164W MRPL15P36523 253 aa9.29□□□□□ -0.92
SHH4YLR164W MTG2P38860 518 aa9.29□□□□□ -0.92
SHH4YLR164W SPO73P40031 143 aa9.29□□□□□ -0.92
SHH4YLR164W YNL195CP40168 261 aa9.29□□□□□ -0.92
SHH4YLR164W GID8P40208 455 aa9.29□□□□□ -0.92
SHH4YLR164W HMS2P47175 358 aa9.29□□□□□ -0.92
SHH4YLR164W TWF1P53250 332 aa9.29□□□□□ -0.92
SHH4YLR164W SNF12P53628 566 aa9.29□□□□□ -0.92
SHH4YLR164W ELP4Q02884 456 aaKnown RBP9.29□□□□□ -0.92
SHH4YLR164W YDR541CQ03049 344 aa9.29□□□□□ -0.92
SHH4YLR164W INP1Q03694 420 aa9.29□□□□□ -0.92
SHH4YLR164W SIZ1Q04195 904 aa9.29□□□□□ -0.92
SHH4YLR164W ATG38Q05789 226 aaKnown RBP9.29□□□□□ -0.92
SHH4YLR164W VPS36Q06696 566 aa9.29□□□□□ -0.92
SHH4YLR164W SFM1Q12314 213 aa9.29□□□□□ -0.92
SHH4YLR164W SEC39Q12745 709 aa9.29□□□□□ -0.92
SHH4YLR164W YIL046W-AQ3E7Z4 54 aa9.29□□□□□ -0.92
SHH4YLR164W HFA1P32874 2273 aa9.28□□□□□ -0.92
SHH4YLR164W CBS1P14066 229 aa9.28□□□□□ -0.92
SHH4YLR164W DBP3P20447 523 aaKnown RBP9.28□□□□□ -0.92
SHH4YLR164W FES1P38260 290 aa9.28□□□□□ -0.92
SHH4YLR164W TRR2P38816 342 aa9.28□□□□□ -0.92
SHH4YLR164W ANS1P38832 159 aa9.28□□□□□ -0.92
SHH4YLR164W YHR219WP38900 624 aa9.28□□□□□ -0.92
SHH4YLR164W SNM1P40993 198 aa9.28□□□□□ -0.92
SHH4YLR164W SMP3Q04174 516 aa9.28□□□□□ -0.92
SHH4YLR164W YPL066WQ12194 479 aa9.28□□□□□ -0.92
SHH4YLR164W RIB3Q99258 208 aa9.28□□□□□ -0.92
SHH4YLR164W IRA2P19158 3079 aa9.28□□□□□ -0.92
SHH4YLR164W KSS1P14681 368 aa9.27□□□□□ -0.93
SHH4YLR164W FAA1P30624 700 aaKnown RBP9.27□□□□□ -0.93
SHH4YLR164W TAF14P35189 244 aa9.27□□□□□ -0.93
SHH4YLR164W ECM34P38728 170 aa9.27□□□□□ -0.93
SHH4YLR164W MBP1P39678 833 aa9.27□□□□□ -0.93
SHH4YLR164W RIO2P40160 425 aaKnown RBP9.27□□□□□ -0.93
SHH4YLR164W MET28P40573 187 aa9.27□□□□□ -0.93
SHH4YLR164W RPS12P48589 143 aaKnown RBP9.27□□□□□ -0.93
SHH4YLR164W ROM1P53046 1155 aa9.27□□□□□ -0.93
SHH4YLR164W YGR012WP53206 393 aa9.27□□□□□ -0.93
SHH4YLR164W MEP3P53390 489 aa9.27□□□□□ -0.93
SHH4YLR164W YPL107WQ02873 248 aa9.27□□□□□ -0.93
SHH4YLR164W SMA2Q04658 369 aa9.27□□□□□ -0.93
SHH4YLR164W TEC1P18412 486 aa9.26□□□□□ -0.93
SHH4YLR164W DAL82P21705 255 aa9.26□□□□□ -0.93
SHH4YLR164W GPI12P23797 304 aa9.26□□□□□ -0.93
SHH4YLR164W YME2P32843 850 aa9.26□□□□□ -0.93
SHH4YLR164W NUF2P33895 451 aa9.26□□□□□ -0.93
SHH4YLR164W TDA11P38854 504 aa9.26□□□□□ -0.93
SHH4YLR164W ICE2P40499 491 aa9.26□□□□□ -0.93
SHH4YLR164W IMD4P50094 524 aaKnown RBP9.26□□□□□ -0.93
SHH4YLR164W MAL11P53048 616 aa9.26□□□□□ -0.93
SHH4YLR164W GRX5Q02784 150 aa9.26□□□□□ -0.93
SHH4YLR164W YPR091CQ06833 770 aa9.26□□□□□ -0.93
SHH4YLR164W GLE1Q12315 538 aa9.26□□□□□ -0.93
SHH4YLR164W BAR1P12630 587 aa9.25□□□□□ -0.93
SHH4YLR164W FAR1P21268 830 aa9.25□□□□□ -0.93
SHH4YLR164W KAP122P32767 1081 aa9.25□□□□□ -0.93
SHH4YLR164W SEA4P38164 1038 aa9.25□□□□□ -0.93
SHH4YLR164W RCY1P39531 840 aa9.25□□□□□ -0.93
SHH4YLR164W ALB1P47019 175 aaPredicted RBP9.25□□□□□ -0.93
SHH4YLR164W EMC2P47133 292 aaKnown RBP9.25□□□□□ -0.93
SHH4YLR164W MPC1P53157 130 aaKnown RBP9.25□□□□□ -0.93
SHH4YLR164W MPA43P53583 542 aaPredicted RBP9.25□□□□□ -0.93
SHH4YLR164W RSN1Q03516 953 aa9.25□□□□□ -0.93
SHH4YLR164W TRS23Q03784 219 aa9.25□□□□□ -0.93
SHH4YLR164W YOR365CQ08844 703 aa9.25□□□□□ -0.93
SHH4YLR164W CYR1P08678 2026 aaKnown RBP9.25□□□□□ -0.93
SHH4YLR164W RPL40AP0CH08 128 aaKnown RBP9.24□□□□□ -0.93
SHH4YLR164W RPL40BP0CH09 128 aaKnown RBP9.24□□□□□ -0.93
SHH4YLR164W BET3P36149 193 aa9.24□□□□□ -0.93
SHH4YLR164W SRO77P38163 1010 aa9.24□□□□□ -0.93
SHH4YLR164W EGD2P38879 174 aaKnown RBP9.24□□□□□ -0.93
SHH4YLR164W UME6P39001 836 aa9.24□□□□□ -0.93
SHH4YLR164W AVT6P40074 448 aa9.24□□□□□ -0.93
SHH4YLR164W BAP3P41815 604 aa9.24□□□□□ -0.93
SHH4YLR164W QRI7P43122 407 aa9.24□□□□□ -0.93
SHH4YLR164W BIT61P47041 543 aa9.24□□□□□ -0.93
SHH4YLR164W AAD10P47182 288 aa9.24□□□□□ -0.93
SHH4YLR164W NUP57P48837 541 aa9.24□□□□□ -0.93
SHH4YLR164W YPL068CQ02749 293 aa9.24□□□□□ -0.93
SHH4YLR164W CDA2Q06703 312 aa9.24□□□□□ -0.93
SHH4YLR164W NBA1Q08229 501 aaKnown RBP9.24□□□□□ -0.93
SHH4YLR164W BDS1Q08347 646 aa9.24□□□□□ -0.93
SHH4YLR164W YDL211CQ12121 372 aa9.24□□□□□ -0.93
SHH4YLR164W TPK3P05986 398 aa9.23□□□□□ -0.93
SHH4YLR164W RPL20AP0CX23 172 aaKnown RBP9.23□□□□□ -0.93
SHH4YLR164W RPL20BP0CX24 172 aaPredicted RBP9.23□□□□□ -0.93
SHH4YLR164W YCR100CP25606 316 aa9.23□□□□□ -0.93
SHH4YLR164W TOD6P34219 525 aa9.23□□□□□ -0.93
SHH4YLR164W TEF4P36008 412 aaKnown RBP9.23□□□□□ -0.93
SHH4YLR164W YHR097CP38809 366 aaKnown RBP9.23□□□□□ -0.93
SHH4YLR164W APE4P38821 490 aa9.23□□□□□ -0.93
SHH4YLR164W PAC1P39946 494 aaKnown RBP9.23□□□□□ -0.93
SHH4YLR164W SCY1P53009 804 aa9.23□□□□□ -0.93
SHH4YLR164W YGR067CP53243 804 aa9.23□□□□□ -0.93
SHH4YLR164W SWP1Q02795 286 aa9.23□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms