RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C SEH1P53011 349 aaKnown RBP9.41□□□□□ -0.9
SHB17YKR043C ATP25Q03153 612 aa9.41□□□□□ -0.9
SHB17YKR043C UGO1Q03327 502 aa9.41□□□□□ -0.9
SHB17YKR043C YKU80Q04437 629 aa9.41□□□□□ -0.9
SHB17YKR043C RPL7BQ12213 244 aaKnown RBP9.41□□□□□ -0.9
SHB17YKR043C ADF1Q2V2Q1 113 aa9.41□□□□□ -0.9
SHB17YKR043C MF(ALPHA)1P01149 165 aa9.4□□□□□ -0.9
SHB17YKR043C RAD7P06779 565 aa9.4□□□□□ -0.9
SHB17YKR043C CYT1P07143 309 aa9.4□□□□□ -0.9
SHB17YKR043C ECM10P39987 644 aa9.4□□□□□ -0.9
SHB17YKR043C SHR5P41912 237 aa9.4□□□□□ -0.9
SHB17YKR043C IRC6P43615 237 aa9.4□□□□□ -0.9
SHB17YKR043C BIT61P47041 543 aa9.4□□□□□ -0.9
SHB17YKR043C TOM22P49334 152 aa9.4□□□□□ -0.9
SHB17YKR043C SKI8Q02793 397 aaPredicted RBP9.4□□□□□ -0.9
SHB17YKR043C SWP1Q02795 286 aa9.4□□□□□ -0.9
SHB17YKR043C YPL107WQ02873 248 aa9.4□□□□□ -0.9
SHB17YKR043C RSC9Q03124 581 aa9.4□□□□□ -0.9
SHB17YKR043C SPC2Q04969 178 aa9.4□□□□□ -0.9
SHB17YKR043C SPO77Q06134 477 aa9.4□□□□□ -0.9
SHB17YKR043C THP1Q08231 455 aa9.4□□□□□ -0.9
SHB17YKR043C YPL272CQ08984 517 aa9.4□□□□□ -0.9
SHB17YKR043C WTM1Q12363 437 aaKnown RBP9.4□□□□□ -0.9
SHB17YKR043C RPS21BQ3E754 87 aaKnown RBP9.4□□□□□ -0.9
SHB17YKR043C DMC1P25453 334 aa9.39□□□□□ -0.91
SHB17YKR043C PBN1P25580 416 aa9.39□□□□□ -0.91
SHB17YKR043C PEX3P28795 441 aa9.39□□□□□ -0.91
SHB17YKR043C TFC1P32367 649 aa9.39□□□□□ -0.91
SHB17YKR043C TEF4P36008 412 aaKnown RBP9.39□□□□□ -0.91
SHB17YKR043C MCM7P38132 845 aa9.39□□□□□ -0.91
SHB17YKR043C MOH1P38191 138 aa9.39□□□□□ -0.91
SHB17YKR043C NOP9P47077 666 aaKnown RBP9.39□□□□□ -0.91
SHB17YKR043C INP1Q03694 420 aa9.39□□□□□ -0.91
SHB17YKR043C SEI1Q06058 285 aa9.39□□□□□ -0.91
SHB17YKR043C YPR109WQ06104 294 aa9.39□□□□□ -0.91
SHB17YKR043C GPI11Q06636 219 aa9.39□□□□□ -0.91
SHB17YKR043C CDA2Q06703 312 aa9.39□□□□□ -0.91
SHB17YKR043C RRT8Q08219 342 aa9.39□□□□□ -0.91
SHB17YKR043C PUS7Q08647 676 aaKnown RBP9.39□□□□□ -0.91
SHB17YKR043C ULA1Q12059 462 aa9.39□□□□□ -0.91
SHB17YKR043C MDM32Q12171 622 aa9.39□□□□□ -0.91
SHB17YKR043C YOS9Q99220 542 aa9.39□□□□□ -0.91
SHB17YKR043C DAT1P13483 248 aaKnown RBP9.38□□□□□ -0.91
SHB17YKR043C DBP3P20447 523 aaKnown RBP9.38□□□□□ -0.91
SHB17YKR043C SWH1P35845 1188 aa9.38□□□□□ -0.91
SHB17YKR043C SKG1P36169 355 aa9.38□□□□□ -0.91
SHB17YKR043C HOL1P53389 586 aa9.38□□□□□ -0.91
SHB17YKR043C YNL181WP53878 407 aa9.38□□□□□ -0.91
SHB17YKR043C NAN1Q02931 896 aaKnown RBP9.38□□□□□ -0.91
SHB17YKR043C YOR342CQ12182 319 aa9.38□□□□□ -0.91
SHB17YKR043C YDL199CQ12407 687 aa9.38□□□□□ -0.91
SHB17YKR043C PNS1Q12412 539 aa9.38□□□□□ -0.91
SHB17YKR043C MHF2Q3E829 80 aa9.38□□□□□ -0.91
SHB17YKR043C YOR032W-AQ8TGS1 66 aa9.38□□□□□ -0.91
SHB17YKR043C TAD3Q9URQ3 322 aa9.38□□□□□ -0.91
SHB17YKR043C KGD1P20967 1014 aaKnown RBP9.37□□□□□ -0.91
SHB17YKR043C CMK2P22517 447 aa9.37□□□□□ -0.91
SHB17YKR043C ARP2P32381 391 aaKnown RBP9.37□□□□□ -0.91
SHB17YKR043C TOD6P34219 525 aa9.37□□□□□ -0.91
SHB17YKR043C RIB1P38066 345 aa9.37□□□□□ -0.91
SHB17YKR043C BIG1P38813 335 aa9.37□□□□□ -0.91
SHB17YKR043C RIO2P40160 425 aaKnown RBP9.37□□□□□ -0.91
SHB17YKR043C SMK1P41808 388 aa9.37□□□□□ -0.91
SHB17YKR043C YNR068CP53754 272 aa9.37□□□□□ -0.91
SHB17YKR043C MTQ1P53944 314 aa9.37□□□□□ -0.91
SHB17YKR043C NCE101Q02820 53 aa9.37□□□□□ -0.91
SHB17YKR043C CTL1Q03220 320 aaKnown RBP9.37□□□□□ -0.91
SHB17YKR043C CGI121Q03705 181 aaKnown RBP9.37□□□□□ -0.91
SHB17YKR043C RIM13Q03792 727 aa9.37□□□□□ -0.91
SHB17YKR043C PAL1Q05518 499 aaKnown RBP9.37□□□□□ -0.91
SHB17YKR043C MDM12Q92328 271 aa9.37□□□□□ -0.91
SHB17YKR043C FLP1P03870 423 aa9.36□□□□□ -0.91
SHB17YKR043C KSS1P14681 368 aa9.36□□□□□ -0.91
SHB17YKR043C SEC2P17065 759 aa9.36□□□□□ -0.91
SHB17YKR043C NUD1P32336 851 aa9.36□□□□□ -0.91
SHB17YKR043C DPH5P32469 300 aaPredicted RBP9.36□□□□□ -0.91
SHB17YKR043C DHR2P36009 735 aaPredicted RBP9.36□□□□□ -0.91
SHB17YKR043C HRB1P38922 454 aaKnown RBP RIP-Chip data9.36□□□□□ -0.91not detected
SHB17YKR043C PKP1P40530 394 aa9.36□□□□□ -0.91
SHB17YKR043C YGR201CP42936 225 aa9.36□□□□□ -0.91
SHB17YKR043C EMC2P47133 292 aaKnown RBP9.36□□□□□ -0.91
SHB17YKR043C TWF1P53250 332 aa9.36□□□□□ -0.91
SHB17YKR043C DCP2P53550 970 aaKnown RBP9.36□□□□□ -0.91
SHB17YKR043C PEX12Q04370 399 aa9.36□□□□□ -0.91
SHB17YKR043C SFM1Q12314 213 aa9.36□□□□□ -0.91
SHB17YKR043C PFK27Q12471 397 aaPredicted RBP9.36□□□□□ -0.91
SHB17YKR043C GPH1P06738 902 aaKnown RBP9.35□□□□□ -0.91
SHB17YKR043C MOD5P07884 428 aa9.35□□□□□ -0.91
SHB17YKR043C ARF1P11076 181 aaKnown RBP9.35□□□□□ -0.91
SHB17YKR043C REC107P21651 314 aa9.35□□□□□ -0.91
SHB17YKR043C HSP150P32478 413 aa9.35□□□□□ -0.91
SHB17YKR043C SNU114P36048 1008 aaKnown RBP9.35□□□□□ -0.91
SHB17YKR043C PDX3P38075 228 aaKnown RBP9.35□□□□□ -0.91
SHB17YKR043C EXO84P38261 753 aa9.35□□□□□ -0.91
SHB17YKR043C AST2P39945 430 aaKnown RBP9.35□□□□□ -0.91
SHB17YKR043C MPM1P40364 252 aa9.35□□□□□ -0.91
SHB17YKR043C UBX6P47049 396 aa9.35□□□□□ -0.91
SHB17YKR043C DSL1P53847 754 aa9.35□□□□□ -0.91
SHB17YKR043C ATG4P53867 494 aa9.35□□□□□ -0.91
SHB17YKR043C YPL068CQ02749 293 aa9.35□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms