RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W RPS16BP0CX52 143 aaKnown RBP3.64□□□□□ -1.83
CTK1YKL139W CLN3P13365 580 aa3.64□□□□□ -1.83
CTK1YKL139W PUT4P15380 627 aa3.64□□□□□ -1.83
CTK1YKL139W OM45P16547 393 aa3.64□□□□□ -1.83
CTK1YKL139W RNA14P25298 677 aaKnown RBP3.64□□□□□ -1.83
CTK1YKL139W YCL068CP25593 260 aa3.64□□□□□ -1.83
CTK1YKL139W YBR137WP38276 179 aa3.64□□□□□ -1.83
CTK1YKL139W END3P39013 349 aa3.64□□□□□ -1.83
CTK1YKL139W PRP39P39682 629 aaKnown RBP3.64□□□□□ -1.83
CTK1YKL139W RPH1P39956 796 aa3.64□□□□□ -1.83
CTK1YKL139W LCP5P40079 357 aaPredicted RBP3.64□□□□□ -1.83
CTK1YKL139W YHC3P47040 408 aa3.64□□□□□ -1.83
CTK1YKL139W GOR1P53839 350 aa3.64□□□□□ -1.83
CTK1YKL139W HXT11P54862 567 aa3.64□□□□□ -1.83
CTK1YKL139W CCE1Q03702 353 aa3.64□□□□□ -1.83
CTK1YKL139W CEX1Q12453 761 aa3.64□□□□□ -1.83
CTK1YKL139W POM152P39685 1337 aa3.64□□□□□ -1.83
CTK1YKL139W SSC1P0CS90 654 aaKnown RBP3.63□□□□□ -1.83
CTK1YKL139W CAP2P13517 287 aa3.63□□□□□ -1.83
CTK1YKL139W CKI1P20485 582 aa3.63□□□□□ -1.83
CTK1YKL139W EXG1P23776 448 aaKnown RBP3.63□□□□□ -1.83
CTK1YKL139W NAT2P37293 288 aa3.63□□□□□ -1.83
CTK1YKL139W CHK1P38147 527 aa3.63□□□□□ -1.83
CTK1YKL139W SWC5P38326 303 aa3.63□□□□□ -1.83
CTK1YKL139W SMP3Q04174 516 aa3.63□□□□□ -1.83
CTK1YKL139W RAX1Q08760 435 aa3.63□□□□□ -1.83
CTK1YKL139W YOR338WQ99326 363 aa3.63□□□□□ -1.83
CTK1YKL139W YLL053CP0CD98 152 aa3.63□□□□□ -1.83
CTK1YKL139W EFB1P32471 206 aaKnown RBP3.63□□□□□ -1.83
CTK1YKL139W YEF1P32622 495 aa3.63□□□□□ -1.83
CTK1YKL139W MIX23P38162 196 aa3.63□□□□□ -1.83
CTK1YKL139W WSC2P53832 503 aa3.63□□□□□ -1.83
CTK1YKL139W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
CTK1YKL139W CAB5Q03941 241 aa3.63□□□□□ -1.83
CTK1YKL139W THP3Q12049 470 aaKnown RBP3.63□□□□□ -1.83
CTK1YKL139W RGT2Q12300 763 aa3.63□□□□□ -1.83
CTK1YKL139W PAB1P04147 577 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
CTK1YKL139W MAS2P11914 482 aa3.62□□□□□ -1.83
CTK1YKL139W CPR1P14832 162 aaKnown RBP3.62□□□□□ -1.83
CTK1YKL139W MCR1P36060 302 aaKnown RBP3.62□□□□□ -1.83
CTK1YKL139W RTC2P38279 296 aa3.62□□□□□ -1.83
CTK1YKL139W JLP2P40206 208 aa3.62□□□□□ -1.83
CTK1YKL139W EGD1Q02642 157 aaKnown RBP3.62□□□□□ -1.83
CTK1YKL139W YLR413WQ06689 675 aa3.62□□□□□ -1.83
CTK1YKL139W MRPL23Q12487 163 aaPredicted RBP3.62□□□□□ -1.83
CTK1YKL139W YIL002W-AQ3E7Z5 69 aa3.62□□□□□ -1.83
CTK1YKL139W MCK1P21965 375 aaKnown RBP3.61□□□□□ -1.83
CTK1YKL139W SPS22P25380 463 aa3.61□□□□□ -1.83
CTK1YKL139W YPS1P32329 569 aa3.61□□□□□ -1.83
CTK1YKL139W MRP4P32902 394 aa3.61□□□□□ -1.83
CTK1YKL139W EBP2P36049 427 aaKnown RBP3.61□□□□□ -1.83
CTK1YKL139W GPX2P38143 162 aa3.61□□□□□ -1.83
CTK1YKL139W MTC6P38849 526 aa3.61□□□□□ -1.83
CTK1YKL139W ABM1P47146 123 aa3.61□□□□□ -1.83
CTK1YKL139W COS10P52924 374 aa3.61□□□□□ -1.83
CTK1YKL139W DBP6P53734 629 aaKnown RBP3.61□□□□□ -1.83
CTK1YKL139W COS1P53822 381 aa3.61□□□□□ -1.83
CTK1YKL139W IBD2P53892 351 aa3.61□□□□□ -1.83
CTK1YKL139W MRPL35Q06678 367 aa3.61□□□□□ -1.83
CTK1YKL139W YDR262WQ12331 272 aa3.61□□□□□ -1.83
CTK1YKL139W MRPL8P22353 238 aa3.6□□□□□ -1.83
CTK1YKL139W ZUO1P32527 433 aaKnown RBP3.6□□□□□ -1.83
CTK1YKL139W MUD1P32605 298 aaKnown RBP3.6□□□□□ -1.83
CTK1YKL139W VAM7P32912 316 aa3.6□□□□□ -1.83
CTK1YKL139W YBP1P38315 674 aa3.6□□□□□ -1.83
CTK1YKL139W GEP4P38812 185 aa3.6□□□□□ -1.83
CTK1YKL139W SEC9P40357 651 aa3.6□□□□□ -1.83
CTK1YKL139W LOC1P43586 204 aaPredicted RBP3.6□□□□□ -1.83
CTK1YKL139W YDL186WP48568 277 aa3.6□□□□□ -1.83
CTK1YKL139W RIB4P50861 169 aaPredicted RBP3.6□□□□□ -1.83
CTK1YKL139W PNC1P53184 216 aaKnown RBP3.6□□□□□ -1.83
CTK1YKL139W AHC1Q12433 566 aa3.6□□□□□ -1.83
CTK1YKL139W MXR2P25566 168 aa3.59□□□□□ -1.83
CTK1YKL139W CIN8P27895 1000 aa3.59□□□□□ -1.83
CTK1YKL139W MNS1P32906 549 aa3.59□□□□□ -1.83
CTK1YKL139W VPS45P38932 577 aa3.59□□□□□ -1.83
CTK1YKL139W YJL213WP40896 331 aa3.59□□□□□ -1.83
CTK1YKL139W AIP1P46680 615 aaKnown RBP3.59□□□□□ -1.83
CTK1YKL139W YMR111CQ04461 462 aaPredicted RBP3.59□□□□□ -1.83
CTK1YKL139W ECM18Q04623 453 aa3.59□□□□□ -1.83
CTK1YKL139W SHS1Q07657 551 aa3.59□□□□□ -1.83
CTK1YKL139W YOL075CQ08234 1294 aa3.59□□□□□ -1.83
CTK1YKL139W APC5Q08683 685 aa3.59□□□□□ -1.83
CTK1YKL139W RGS2Q99188 309 aa3.59□□□□□ -1.83
CTK1YKL139W RPL18AP0CX49 186 aaKnown RBP3.59□□□□□ -1.84
CTK1YKL139W RPL18BP0CX50 186 aaKnown RBP3.59□□□□□ -1.84
CTK1YKL139W BUD2P33314 1104 aa3.59□□□□□ -1.84
CTK1YKL139W MRPS5P33759 307 aa3.59□□□□□ -1.84
CTK1YKL139W TIR2P33890 251 aa3.59□□□□□ -1.84
CTK1YKL139W MDM31P38880 579 aa3.59□□□□□ -1.84
CTK1YKL139W YMR134WP40207 237 aa3.59□□□□□ -1.84
CTK1YKL139W YFL067WP43537 175 aa3.59□□□□□ -1.84
CTK1YKL139W NCA3P46955 337 aa3.59□□□□□ -1.84
CTK1YKL139W GCD14P46959 383 aaPredicted RBP3.59□□□□□ -1.84
CTK1YKL139W RPN14P53196 417 aa3.59□□□□□ -1.84
CTK1YKL139W NAT4Q04751 285 aa3.59□□□□□ -1.84
CTK1YKL139W VAC14Q06708 880 aa3.59□□□□□ -1.84
CTK1YKL139W GAT3Q07928 141 aa3.59□□□□□ -1.84
CTK1YKL139W GDH1P07262 454 aaKnown RBP3.58□□□□□ -1.84
CTK1YKL139W HEM15P16622 393 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 91.7 ms