RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPS1	YJL172W	PUS4	P48567	403 aa	Known RBP	4.65	□□□□□ -1.67
CPS1	YJL172W	HSV2	P50079	448 aa	Predicted RBP	4.65	□□□□□ -1.67
CPS1	YJL172W	SUT1	P53032	299 aa	Known RBP	4.65	□□□□□ -1.67
CPS1	YJL172W	SLI1	P53304	468 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	RSM27	P53305	110 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	YTP1	P53584	459 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	YNL181W	P53878	407 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	TIM10	P87108	93 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	YMR265C	Q03508	461 aa	Known RBP	4.65	□□□□□ -1.67
CPS1	YJL172W	DLT1	Q04216	342 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	YDR278C	Q05612	105 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	VID22	Q05934	901 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	ASA1	Q06822	443 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	FMP45	Q07651	309 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	MFG1	Q07684	458 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	YEH1	Q07804	573 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	AAD15	Q08361	143 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	YOR342C	Q12182	319 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	GTT2	Q12390	233 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	SKS1	Q12505	502 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	IZH4	Q99393	312 aa		4.65	□□□□□ -1.67
CPS1	YJL172W	UBR2	Q07963	1872 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	GCR1	P07261	785 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	DST1	P07273	309 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	PUT2	P07275	575 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	GAL7	P08431	366 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	SPS4	P09937	338 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	PPH22	P23595	377 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	PRE9	P23638	258 aa	Known RBP	4.64	□□□□□ -1.67
CPS1	YJL172W	GEX1	P25596	615 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	LAC1	P28496	418 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	MCM5	P29496	775 aa	Known RBP	4.64	□□□□□ -1.67
CPS1	YJL172W	ATP11	P32453	318 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	ECM25	P32525	599 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	IMP3	P32899	183 aa	Predicted RBP	4.64	□□□□□ -1.67
CPS1	YJL172W	SGE1	P33335	543 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	SOF1	P33750	489 aa	Known RBP	4.64	□□□□□ -1.67
CPS1	YJL172W	SRP102	P36057	244 aa	Predicted RBP	4.64	□□□□□ -1.67
CPS1	YJL172W	ECM13	P38195	257 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	BIT2	P38346	545 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	URA8	P38627	578 aa	Predicted RBP	4.64	□□□□□ -1.67
CPS1	YJL172W	CEM1	P39525	442 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	MGS1	P40151	587 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	SIP4	P46954	829 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	YJL045W	P47052	634 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	UFD1	P53044	361 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	ARO8	P53090	500 aa	Known RBP	4.64	□□□□□ -1.67
CPS1	YJL172W	FMP48	P53233	369 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	LEE1	Q02799	301 aa	Known RBP	4.64	□□□□□ -1.67
CPS1	YJL172W	MTQ2	Q03920	221 aa	Predicted RBP	4.64	□□□□□ -1.67
CPS1	YJL172W	CSN9	Q03981	162 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	PEX12	Q04370	399 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	ARG7	Q04728	441 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	GAL83	Q04739	417 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	CIA1	Q05583	330 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	UTP21	Q06078	939 aa	Predicted RBP	4.64	□□□□□ -1.67
CPS1	YJL172W	YPR127W	Q06494	345 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	YPQ1	Q12010	308 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	YLL056C	Q12177	298 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	PFK27	Q12471	397 aa	Predicted RBP	4.64	□□□□□ -1.67
CPS1	YJL172W	DFG16	Q99234	619 aa		4.64	□□□□□ -1.67
CPS1	YJL172W	CDC4	P07834	779 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	INO1	P11986	533 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	TOP3	P13099	656 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	MET16	P18408	261 aa	Predicted RBP	4.63	□□□□□ -1.67
CPS1	YJL172W	FPS1	P23900	669 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	URA7	P28274	579 aa	Known RBP	4.63	□□□□□ -1.67
CPS1	YJL172W	MKK2	P32491	506 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	NUP2	P32499	720 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
CPS1	YJL172W	LHP1	P33399	275 aa	Known RBP	4.63	□□□□□ -1.67
CPS1	YJL172W	PTC1	P35182	281 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	AIM29	P36154	155 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	RPF2	P36160	344 aa	Known RBP	4.63	□□□□□ -1.67
CPS1	YJL172W	YBP1	P38315	674 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	CKB2	P38930	258 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	MNN9	P39107	395 aa	Known RBP	4.63	□□□□□ -1.67
CPS1	YJL172W	ATF1	P40353	525 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	CIN1	P40987	1014 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	MRPS18	P42847	217 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	AAD14	P42884	376 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	BST1	P43571	1029 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	IRC7	P43623	340 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	NIT2	P47016	307 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	NBP35	P52920	328 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	DIA1	P54005	336 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
CPS1	YJL172W	MRPL13	Q02204	264 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	YDR541C	Q03049	344 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	OST6	Q03723	332 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	ENT5	Q03769	411 aa	Known RBP	4.63	□□□□□ -1.67
CPS1	YJL172W	OPT2	Q06593	877 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	YLR012C	Q07927	99 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	ZEO1	Q08245	113 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	FEX1	Q08913	375 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	TGL5	Q12043	749 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	RTK1	Q12100	620 aa	Predicted RBP	4.63	□□□□□ -1.67
CPS1	YJL172W	YOR214C	Q12282	236 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	GPM3	Q12326	303 aa		4.63	□□□□□ -1.67
CPS1	YJL172W	LPX1	Q12405	387 aa	Known RBP	4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms