RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W BAG7Q12128 409 aa5.73□□□□□ -1.49
PRE3YJL001W YRA1Q12159 226 aaKnown RBP5.73□□□□□ -1.49
PRE3YJL001W AHA1Q12449 350 aaKnown RBP5.73□□□□□ -1.49
PRE3YJL001W YCL012CQ8J0M4 134 aa5.73□□□□□ -1.49
PRE3YJL001W Q0010Q9ZZX9 128 aa5.73□□□□□ -1.49
PRE3YJL001W GCD2P12754 651 aaPredicted RBP5.72□□□□□ -1.49
PRE3YJL001W SGV1P23293 657 aaKnown RBP5.72□□□□□ -1.49
PRE3YJL001W DPB3P27344 201 aa5.72□□□□□ -1.49
PRE3YJL001W NFU1P32860 256 aa5.72□□□□□ -1.49
PRE3YJL001W PTR2P32901 601 aa5.72□□□□□ -1.49
PRE3YJL001W TOD6P34219 525 aa5.72□□□□□ -1.49
PRE3YJL001W DOA1P36037 715 aa5.72□□□□□ -1.49
PRE3YJL001W BMT2P38278 337 aa5.72□□□□□ -1.49
PRE3YJL001W COA1P40452 197 aa5.72□□□□□ -1.49
PRE3YJL001W FKH2P41813 862 aa5.72□□□□□ -1.49
PRE3YJL001W ECO1P43605 281 aa5.72□□□□□ -1.49
PRE3YJL001W HMO1Q03973 246 aaKnown RBP5.72□□□□□ -1.49
PRE3YJL001W TAF11Q04226 346 aa5.72□□□□□ -1.49
PRE3YJL001W ENB1Q08299 606 aa5.72□□□□□ -1.49
PRE3YJL001W NMD4Q12129 218 aa5.72□□□□□ -1.49
PRE3YJL001W YSF3P0C074 85 aaPredicted RBP5.71□□□□□ -1.5
PRE3YJL001W PHA2P32452 334 aa5.71□□□□□ -1.5
PRE3YJL001W RPS1AP33442 255 aaKnown RBP5.71□□□□□ -1.5
PRE3YJL001W RPC37P36121 282 aa5.71□□□□□ -1.5
PRE3YJL001W YBR062CP38239 180 aa5.71□□□□□ -1.5
PRE3YJL001W PEP8P40335 379 aa5.71□□□□□ -1.5
PRE3YJL001W AXL1P40851 1208 aa5.71□□□□□ -1.5
PRE3YJL001W GCD10P41814 478 aa5.71□□□□□ -1.5
PRE3YJL001W IRC5P43610 853 aa5.71□□□□□ -1.5
PRE3YJL001W MDV1P47025 714 aa5.71□□□□□ -1.5
PRE3YJL001W YPT32P51996 222 aaKnown RBP5.71□□□□□ -1.5
PRE3YJL001W AIF1P52923 378 aa5.71□□□□□ -1.5
PRE3YJL001W SHR3Q02774 210 aa5.71□□□□□ -1.5
PRE3YJL001W SKI8Q02793 397 aaPredicted RBP5.71□□□□□ -1.5
PRE3YJL001W YMR155WQ03795 547 aa5.71□□□□□ -1.5
PRE3YJL001W VBA4Q04602 768 aaKnown RBP5.71□□□□□ -1.5
PRE3YJL001W VPS36Q06696 566 aa5.71□□□□□ -1.5
PRE3YJL001W NUR1Q12066 484 aa5.71□□□□□ -1.5
PRE3YJL001W ARG4P04076 463 aaPredicted RBP5.7□□□□□ -1.5
PRE3YJL001W PTH2P34222 208 aa5.7□□□□□ -1.5
PRE3YJL001W IFA38P38286 347 aa5.7□□□□□ -1.5
PRE3YJL001W NAB3P38996 802 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
PRE3YJL001W IES5P40060 125 aa5.7□□□□□ -1.5
PRE3YJL001W PKP1P40530 394 aa5.7□□□□□ -1.5
PRE3YJL001W MPS3P47069 682 aa5.7□□□□□ -1.5
PRE3YJL001W YJR141WP47172 347 aaPredicted RBP5.7□□□□□ -1.5
PRE3YJL001W BIO4P53630 237 aa5.7□□□□□ -1.5
PRE3YJL001W YNL058CP53947 316 aa5.7□□□□□ -1.5
PRE3YJL001W MSC1Q03104 513 aa5.7□□□□□ -1.5
PRE3YJL001W YLR352WQ06479 807 aa5.7□□□□□ -1.5
PRE3YJL001W YOL019WQ08157 551 aa5.7□□□□□ -1.5
PRE3YJL001W RCN2Q12044 265 aa5.7□□□□□ -1.5
PRE3YJL001W PRP46Q12417 451 aaPredicted RBP5.7□□□□□ -1.5
PRE3YJL001W HXK2P04807 486 aaKnown RBP5.69□□□□□ -1.5
PRE3YJL001W DAP2P18962 818 aa5.69□□□□□ -1.5
PRE3YJL001W COX13P32799 129 aa5.69□□□□□ -1.5
PRE3YJL001W BYE1P36106 594 aa5.69□□□□□ -1.5
PRE3YJL001W AUR1P36107 401 aaPredicted RBP5.69□□□□□ -1.5
PRE3YJL001W APE4P38821 490 aa5.69□□□□□ -1.5
PRE3YJL001W SPC97P38863 823 aa5.69□□□□□ -1.5
PRE3YJL001W YHB1P39676 399 aaKnown RBP5.69□□□□□ -1.5
PRE3YJL001W LSM4P40070 187 aaKnown RBP5.69□□□□□ -1.5
PRE3YJL001W YIL001WP40560 513 aa5.69□□□□□ -1.5
PRE3YJL001W BUD8P41698 603 aa5.69□□□□□ -1.5
PRE3YJL001W QRI7P43122 407 aa5.69□□□□□ -1.5
PRE3YJL001W IRC6P43615 237 aa5.69□□□□□ -1.5
PRE3YJL001W ALB1P47019 175 aaPredicted RBP5.69□□□□□ -1.5
PRE3YJL001W NOP9P47077 666 aaKnown RBP5.69□□□□□ -1.5
PRE3YJL001W EMC2P47133 292 aaKnown RBP5.69□□□□□ -1.5
PRE3YJL001W TAF4P50105 388 aa5.69□□□□□ -1.5
PRE3YJL001W LSC1P53598 329 aaKnown RBP5.69□□□□□ -1.5
PRE3YJL001W YNL140CP53910 189 aa5.69□□□□□ -1.5
PRE3YJL001W YML131WQ03102 365 aa5.69□□□□□ -1.5
PRE3YJL001W CGI121Q03705 181 aaKnown RBP5.69□□□□□ -1.5
PRE3YJL001W SEC10Q06245 871 aa5.69□□□□□ -1.5
PRE3YJL001W YDL121CQ07541 149 aa5.69□□□□□ -1.5
PRE3YJL001W YEH1Q07804 573 aa5.69□□□□□ -1.5
PRE3YJL001W MLH3Q12083 715 aa5.69□□□□□ -1.5
PRE3YJL001W YOL114CQ12322 202 aa5.69□□□□□ -1.5
PRE3YJL001W YOR019WQ99248 730 aa5.69□□□□□ -1.5
PRE3YJL001W YLR358CO13565 187 aa5.68□□□□□ -1.5
PRE3YJL001W STE7P06784 515 aa5.68□□□□□ -1.5
PRE3YJL001W SRV2P17555 526 aaKnown RBP5.68□□□□□ -1.5
PRE3YJL001W MRPL25P23369 157 aa5.68□□□□□ -1.5
PRE3YJL001W GPI12P23797 304 aa5.68□□□□□ -1.5
PRE3YJL001W SLM5P25345 492 aaKnown RBP5.68□□□□□ -1.5
PRE3YJL001W IDH2P28241 369 aaKnown RBP5.68□□□□□ -1.5
PRE3YJL001W YEL043WP32618 956 aa5.68□□□□□ -1.5
PRE3YJL001W YPT7P32939 208 aa5.68□□□□□ -1.5
PRE3YJL001W SDS22P36047 338 aa5.68□□□□□ -1.5
PRE3YJL001W SET3P36124 751 aa5.68□□□□□ -1.5
PRE3YJL001W MNN2P38069 597 aa5.68□□□□□ -1.5
PRE3YJL001W OLA1P38219 394 aaKnown RBP5.68□□□□□ -1.5
PRE3YJL001W PHO89P38361 574 aa5.68□□□□□ -1.5
PRE3YJL001W GRE3P38715 327 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
PRE3YJL001W YJL206CP39529 758 aa5.68□□□□□ -1.5
PRE3YJL001W RPE1P46969 238 aa5.68□□□□□ -1.5
PRE3YJL001W BIT61P47041 543 aa5.68□□□□□ -1.5
PRE3YJL001W PDR16P53860 351 aaKnown RBP5.68□□□□□ -1.5
PRE3YJL001W INN1P53901 409 aa5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms