RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W VPS33P20795 691 aa3.31□□□□□ -1.88
BCD1YHR040W PDE1P22434 369 aa3.31□□□□□ -1.88
BCD1YHR040W CMK2P22517 447 aa3.31□□□□□ -1.88
BCD1YHR040W CPR2P23285 205 aa3.31□□□□□ -1.88
BCD1YHR040W PEX1P24004 1043 aa3.31□□□□□ -1.88
BCD1YHR040W CLB2P24869 491 aa3.31□□□□□ -1.88
BCD1YHR040W RBK1P25332 333 aa3.31□□□□□ -1.88
BCD1YHR040W CIN8P27895 1000 aa3.31□□□□□ -1.88
BCD1YHR040W PRE2P30656 287 aaKnown RBP3.31□□□□□ -1.88
BCD1YHR040W SYN8P31377 255 aa3.31□□□□□ -1.88
BCD1YHR040W DPH5P32469 300 aaPredicted RBP3.31□□□□□ -1.88
BCD1YHR040W DEF1P35732 738 aaKnown RBP3.31□□□□□ -1.88
BCD1YHR040W LHS1P36016 881 aa3.31□□□□□ -1.88
BCD1YHR040W SPC34P36131 295 aa3.31□□□□□ -1.88
BCD1YHR040W GLG1P36143 616 aa3.31□□□□□ -1.88
BCD1YHR040W GEX2P36173 615 aa3.31□□□□□ -1.88
BCD1YHR040W RBG1P39729 369 aa3.31□□□□□ -1.88
BCD1YHR040W LRO1P40345 661 aa3.31□□□□□ -1.88
BCD1YHR040W UTP18P40362 594 aaPredicted RBP3.31□□□□□ -1.88
BCD1YHR040W HPM1P40481 377 aa3.31□□□□□ -1.88
BCD1YHR040W MSS2P40990 351 aa3.31□□□□□ -1.88
BCD1YHR040W FKH2P41813 862 aa3.31□□□□□ -1.88
BCD1YHR040W AIM23P47015 356 aa3.31□□□□□ -1.88
BCD1YHR040W MSE1P48525 536 aa3.31□□□□□ -1.88
BCD1YHR040W KEL2P50090 882 aa3.31□□□□□ -1.88
BCD1YHR040W COS12P53053 380 aa3.31□□□□□ -1.88
BCD1YHR040W COQ6P53318 479 aa3.31□□□□□ -1.88
BCD1YHR040W TRM112P53738 135 aaPredicted RBP3.31□□□□□ -1.88
BCD1YHR040W PRM1P53835 661 aa3.31□□□□□ -1.88
BCD1YHR040W YNL033WP53964 284 aa3.31□□□□□ -1.88
BCD1YHR040W YNL019CP53975 284 aa3.31□□□□□ -1.88
BCD1YHR040W YPL107WQ02873 248 aa3.31□□□□□ -1.88
BCD1YHR040W YMR178WQ03219 274 aaKnown RBP3.31□□□□□ -1.88
BCD1YHR040W GOT1Q03554 138 aa3.31□□□□□ -1.88
BCD1YHR040W YDR239CQ03780 787 aa3.31□□□□□ -1.88
BCD1YHR040W RAD33Q04231 177 aa3.31□□□□□ -1.88
BCD1YHR040W GAD1Q04792 585 aa3.31□□□□□ -1.88
BCD1YHR040W RSF1Q05043 376 aa3.31□□□□□ -1.88
BCD1YHR040W GLO2Q05584 274 aa3.31□□□□□ -1.88
BCD1YHR040W FAR10Q06001 478 aa3.31□□□□□ -1.88
BCD1YHR040W ASA1Q06822 443 aa3.31□□□□□ -1.88
BCD1YHR040W HBT1Q07653 1046 aaKnown RBP3.31□□□□□ -1.88
BCD1YHR040W YEH1Q07804 573 aa3.31□□□□□ -1.88
BCD1YHR040W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
BCD1YHR040W MSH5Q12175 901 aa3.31□□□□□ -1.88
BCD1YHR040W RRP42Q12277 265 aaPredicted RBP3.31□□□□□ -1.88
BCD1YHR040W RPN6Q12377 434 aa3.31□□□□□ -1.88
BCD1YHR040W FRE6Q12473 712 aa3.31□□□□□ -1.88
BCD1YHR040W HRP1Q99383 534 aaKnown RBP3.31□□□□□ -1.88
BCD1YHR040W SEN1Q00416 2231 aaKnown RBP3.31□□□□□ -1.88
BCD1YHR040W RAS2P01120 322 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W REP1P03871 373 aa3.3□□□□□ -1.88
BCD1YHR040W SPT3P06844 337 aa3.3□□□□□ -1.88
BCD1YHR040W TRP4P07285 380 aaPredicted RBP3.3□□□□□ -1.88
BCD1YHR040W MET3P08536 511 aa3.3□□□□□ -1.88
BCD1YHR040W SNF4P12904 322 aa3.3□□□□□ -1.88
BCD1YHR040W AMD1P15274 810 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W THR1P17423 357 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W CNA1P23287 553 aa3.3□□□□□ -1.88
BCD1YHR040W PPH22P23595 377 aa3.3□□□□□ -1.88
BCD1YHR040W PHO84P25297 587 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W GEX1P25596 615 aa3.3□□□□□ -1.88
BCD1YHR040W PEX3P28795 441 aa3.3□□□□□ -1.88
BCD1YHR040W CDC5P32562 705 aa3.3□□□□□ -1.88
BCD1YHR040W SPS19P32573 292 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W UGP1P32861 499 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W NUF2P33895 451 aa3.3□□□□□ -1.88
BCD1YHR040W UTP11P34247 250 aaPredicted RBP3.3□□□□□ -1.88
BCD1YHR040W PTC1P35182 281 aa3.3□□□□□ -1.88
BCD1YHR040W AUR1P36107 401 aaPredicted RBP3.3□□□□□ -1.88
BCD1YHR040W RPF2P36160 344 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W SKG1P36169 355 aa3.3□□□□□ -1.88
BCD1YHR040W MRPL17P36528 281 aa3.3□□□□□ -1.88
BCD1YHR040W PDX3P38075 228 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W ROT2P38138 954 aa3.3□□□□□ -1.88
BCD1YHR040W FES1P38260 290 aa3.3□□□□□ -1.88
BCD1YHR040W BMT2P38278 337 aa3.3□□□□□ -1.88
BCD1YHR040W EHT1P38295 451 aa3.3□□□□□ -1.88
BCD1YHR040W ARP1P38696 384 aa3.3□□□□□ -1.88
BCD1YHR040W DBP8P38719 431 aa3.3□□□□□ -1.88
BCD1YHR040W MTG2P38860 518 aa3.3□□□□□ -1.88
BCD1YHR040W YHR218WP38899 603 aa3.3□□□□□ -1.88
BCD1YHR040W YJL193WP39542 402 aa3.3□□□□□ -1.88
BCD1YHR040W NPT1P39683 429 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W GET2P40056 285 aa3.3□□□□□ -1.88
BCD1YHR040W GAB1P41733 394 aa3.3□□□□□ -1.88
BCD1YHR040W VMA13P41807 478 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W ZIM17P42844 174 aa3.3□□□□□ -1.88
BCD1YHR040W ELP2P42935 788 aa3.3□□□□□ -1.88
BCD1YHR040W FAR7P43592 221 aa3.3□□□□□ -1.88
BCD1YHR040W IDS2P46958 469 aa3.3□□□□□ -1.88
BCD1YHR040W YJR154WP47181 346 aa3.3□□□□□ -1.88
BCD1YHR040W MDM34P53083 459 aa3.3□□□□□ -1.88
BCD1YHR040W DCP2P53550 970 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W TEX1P53851 422 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W IMP4P53941 290 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W SKI8Q02793 397 aaPredicted RBP3.3□□□□□ -1.88
BCD1YHR040W SWP1Q02795 286 aa3.3□□□□□ -1.88
BCD1YHR040W NRG1Q03125 231 aa3.3□□□□□ -1.88
BCD1YHR040W GAS3Q03655 524 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms