RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W UBC9P50623 157 aaPredicted RBP4.46□□□□□ -1.7
VPS29YHR012W TAF6P53040 516 aa4.46□□□□□ -1.7
VPS29YHR012W MON1P53129 644 aa4.46□□□□□ -1.7
VPS29YHR012W BUD9P53226 547 aa4.46□□□□□ -1.7
VPS29YHR012W CUS2P53830 285 aaPredicted RBP4.46□□□□□ -1.7
VPS29YHR012W YDR249CQ03787 373 aa4.46□□□□□ -1.7
VPS29YHR012W YMR310CQ04867 317 aaPredicted RBP4.46□□□□□ -1.7
VPS29YHR012W SSQ1Q05931 657 aaPredicted RBP4.46□□□□□ -1.7
VPS29YHR012W YLR352WQ06479 807 aa4.46□□□□□ -1.7
VPS29YHR012W RDR1Q08904 546 aa4.46□□□□□ -1.7
VPS29YHR012W NCA2Q12374 616 aa4.46□□□□□ -1.7
VPS29YHR012W SAS5Q99314 248 aa4.46□□□□□ -1.7
VPS29YHR012W NPP1P25353 742 aa4.45□□□□□ -1.7
VPS29YHR012W NUP2P32499 720 aa4.45□□□□□ -1.7
VPS29YHR012W MRE11P32829 692 aa4.45□□□□□ -1.7
VPS29YHR012W TEF4P36008 412 aaKnown RBP4.45□□□□□ -1.7
VPS29YHR012W YOR062CP36025 268 aa4.45□□□□□ -1.7
VPS29YHR012W EXO84P38261 753 aa4.45□□□□□ -1.7
VPS29YHR012W APD1P38281 316 aa4.45□□□□□ -1.7
VPS29YHR012W VPS41P38959 992 aa4.45□□□□□ -1.7
VPS29YHR012W RIC1P40395 1056 aa4.45□□□□□ -1.7
VPS29YHR012W LYS12P40495 371 aaKnown RBP4.45□□□□□ -1.7
VPS29YHR012W CCT7P42943 550 aaKnown RBP4.45□□□□□ -1.7
VPS29YHR012W RPE1P46969 238 aa4.45□□□□□ -1.7
VPS29YHR012W PAC10P48363 199 aa4.45□□□□□ -1.7
VPS29YHR012W KEL2P50090 882 aa4.45□□□□□ -1.7
VPS29YHR012W MRM2P53123 320 aa4.45□□□□□ -1.7
VPS29YHR012W YDR476CQ03362 224 aa4.45□□□□□ -1.7
VPS29YHR012W MIX14Q04341 121 aa4.45□□□□□ -1.7
VPS29YHR012W GAS2Q06135 555 aa4.45□□□□□ -1.7
VPS29YHR012W SFH1Q06168 426 aa4.45□□□□□ -1.7
VPS29YHR012W EMG1Q06287 252 aaKnown RBP4.45□□□□□ -1.7
VPS29YHR012W YPQ2Q06328 317 aa4.45□□□□□ -1.7
VPS29YHR012W YLR413WQ06689 675 aa4.45□□□□□ -1.7
VPS29YHR012W SGT1Q08446 395 aa4.45□□□□□ -1.7
VPS29YHR012W Q0144Q9ZZW2 109 aa4.45□□□□□ -1.7
VPS29YHR012W SEC16P48415 2195 aaKnown RBP4.45□□□□□ -1.7
VPS29YHR012W CAR1P00812 333 aaKnown RBP4.44□□□□□ -1.7
VPS29YHR012W FLP1P03870 423 aa4.44□□□□□ -1.7
VPS29YHR012W ALG7P07286 448 aa4.44□□□□□ -1.7
VPS29YHR012W MET2P08465 486 aa4.44□□□□□ -1.7
VPS29YHR012W YCR051WP25631 222 aa4.44□□□□□ -1.7
VPS29YHR012W PTC6P25646 442 aa4.44□□□□□ -1.7
VPS29YHR012W RPC19P28000 142 aaKnown RBP4.44□□□□□ -1.7
VPS29YHR012W ATS1P31386 333 aa4.44□□□□□ -1.7
VPS29YHR012W ARN1P38731 627 aa4.44□□□□□ -1.7
VPS29YHR012W GAB1P41733 394 aa4.44□□□□□ -1.7
VPS29YHR012W YJL043WP47053 257 aa4.44□□□□□ -1.7
VPS29YHR012W PGU1P47180 361 aa4.44□□□□□ -1.7
VPS29YHR012W LGE1Q02796 332 aaKnown RBP4.44□□□□□ -1.7
VPS29YHR012W NCE101Q02820 53 aa4.44□□□□□ -1.7
VPS29YHR012W URC2Q04411 772 aa4.44□□□□□ -1.7
VPS29YHR012W YRM1Q12340 786 aa4.44□□□□□ -1.7
VPS29YHR012W TSC13Q99190 310 aa4.44□□□□□ -1.7
VPS29YHR012W RPS31P05759 152 aaKnown RBP4.43□□□□□ -1.7
VPS29YHR012W CAR2P07991 424 aaKnown RBP4.43□□□□□ -1.7
VPS29YHR012W RNA1P11745 407 aaKnown RBP4.43□□□□□ -1.7
VPS29YHR012W HMG1P12683 1054 aa4.43□□□□□ -1.7
VPS29YHR012W NCP1P16603 691 aaKnown RBP4.43□□□□□ -1.7
VPS29YHR012W KGD1P20967 1014 aaKnown RBP4.43□□□□□ -1.7
VPS29YHR012W MCK1P21965 375 aaKnown RBP4.43□□□□□ -1.7
VPS29YHR012W MAK32P23060 363 aa4.43□□□□□ -1.7
VPS29YHR012W YCL049CP25577 312 aa4.43□□□□□ -1.7
VPS29YHR012W PHO91P27514 894 aa4.43□□□□□ -1.7
VPS29YHR012W DEP1P31385 405 aa4.43□□□□□ -1.7
VPS29YHR012W PUP2P32379 260 aa4.43□□□□□ -1.7
VPS29YHR012W YSC84P32793 468 aa4.43□□□□□ -1.7
VPS29YHR012W EMP70P32802 667 aa4.43□□□□□ -1.7
VPS29YHR012W MAL32P38158 584 aa4.43□□□□□ -1.7
VPS29YHR012W YBL029WP38201 376 aa4.43□□□□□ -1.7
VPS29YHR012W ALG14P38242 237 aa4.43□□□□□ -1.7
VPS29YHR012W ATG14P38270 344 aa4.43□□□□□ -1.7
VPS29YHR012W FAD1P38913 306 aa4.43□□□□□ -1.7
VPS29YHR012W YJL193WP39542 402 aa4.43□□□□□ -1.7
VPS29YHR012W TOK1P40310 691 aa4.43□□□□□ -1.7
VPS29YHR012W CDH1P53197 566 aa4.43□□□□□ -1.7
VPS29YHR012W TPC1P53257 314 aa4.43□□□□□ -1.7
VPS29YHR012W MKC7P53379 596 aa4.43□□□□□ -1.7
VPS29YHR012W YNL165WP53891 406 aa4.43□□□□□ -1.7
VPS29YHR012W REX2P54964 269 aaKnown RBP4.43□□□□□ -1.7
VPS29YHR012W SWP1Q02795 286 aa4.43□□□□□ -1.7
VPS29YHR012W YPL107WQ02873 248 aa4.43□□□□□ -1.7
VPS29YHR012W PAL1Q05518 499 aaKnown RBP4.43□□□□□ -1.7
VPS29YHR012W CRR1Q05790 422 aa4.43□□□□□ -1.7
VPS29YHR012W BUR2Q05949 395 aa4.43□□□□□ -1.7
VPS29YHR012W ARR1Q06596 294 aa4.43□□□□□ -1.7
VPS29YHR012W YLR036CQ07986 203 aa4.43□□□□□ -1.7
VPS29YHR012W FLO9P39712 1322 aa4.43□□□□□ -1.7
VPS29YHR012W CBP2P03874 630 aaPredicted RBP4.42□□□□□ -1.7
VPS29YHR012W CBP6P07253 162 aaPredicted RBP4.42□□□□□ -1.7
VPS29YHR012W UNG1P12887 359 aa4.42□□□□□ -1.7
VPS29YHR012W KSS1P14681 368 aa4.42□□□□□ -1.7
VPS29YHR012W PDX1P16451 410 aa4.42□□□□□ -1.7
VPS29YHR012W GAS1P22146 559 aaKnown RBP4.42□□□□□ -1.7
VPS29YHR012W STE14P32584 239 aa4.42□□□□□ -1.7
VPS29YHR012W SSE1P32589 693 aaKnown RBP4.42□□□□□ -1.7
VPS29YHR012W SEC17P32602 292 aa4.42□□□□□ -1.7
VPS29YHR012W YEF1P32622 495 aa4.42□□□□□ -1.7
VPS29YHR012W TOD6P34219 525 aa4.42□□□□□ -1.7
VPS29YHR012W YBR032WP38223 100 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms