RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	MNL1	P38888	796 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	SER3	P40054	469 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	YMR134W	P40207	237 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	YIL152W	P40455	235 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	TFG2	P41896	400 aa	Predicted RBP	3.98	□□□□□ -1.77
UBC8	YEL012W	RPC17	P47076	161 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	SRB7	P47822	140 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	TIS11	P47977	285 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	NNF2	P53253	936 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	BTN2	P53286	410 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	RBG2	P53295	368 aa	Known RBP	3.98	□□□□□ -1.77
UBC8	YEL012W	GRS2	Q06817	618 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	YDL218W	Q07629	317 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	HUA2	Q12134	243 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	YPR022C	Q12139	1133 aa		3.98	□□□□□ -1.77
UBC8	YEL012W	MDM35	O60200	86 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	QCR6	P00127	147 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	YPT1	P01123	206 aa	Known RBP	3.97	□□□□□ -1.77
UBC8	YEL012W	SEC53	P07283	254 aa	Known RBP	3.97	□□□□□ -1.77
UBC8	YEL012W	POL4	P25615	582 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	HXT1	P32465	570 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	SOF1	P33750	489 aa	Known RBP	3.97	□□□□□ -1.77
UBC8	YEL012W	RRP1	P35178	278 aa	Predicted RBP	3.97	□□□□□ -1.77
UBC8	YEL012W	LHS1	P36016	881 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	AUR1	P36107	401 aa	Predicted RBP	3.97	□□□□□ -1.77
UBC8	YEL012W	YBL029W	P38201	376 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	YSW1	P38280	609 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	MSG5	P38590	489 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	YHR045W	P38775	560 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	MET30	P39014	640 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	MRX1	P40050	688 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	SCC4	P40090	624 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	CTK2	P46962	323 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	BPL1	P48445	690 aa	Predicted RBP	3.97	□□□□□ -1.77
UBC8	YEL012W	EAF7	P53911	425 aa	Known RBP	3.97	□□□□□ -1.77
UBC8	YEL012W	YMR114C	Q04471	368 aa	Known RBP	3.97	□□□□□ -1.77
UBC8	YEL012W	YOR012W	Q12351	137 aa		3.97	□□□□□ -1.77
UBC8	YEL012W	YER145C-A	A0A023PYF4	145 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	STE2	D6VTK4	431 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	ARG3	P05150	338 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	HOM3	P10869	527 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	RPS27A	P35997	82 aa	Known RBP	3.96	□□□□□ -1.78
UBC8	YEL012W	SNU114	P36048	1008 aa	Known RBP	3.96	□□□□□ -1.78
UBC8	YEL012W	INM1	P38710	295 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	RPS27B	P38711	82 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	DHH1	P39517	506 aa	Known RBP	3.96	□□□□□ -1.78
UBC8	YEL012W	SEC9	P40357	651 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	EFM4	P40516	257 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	PKP1	P40530	394 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	LCL3	P53153	274 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	YNL058C	P53947	316 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	NUP53	Q03790	475 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	TAF11	Q04226	346 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	NOP6	Q07623	225 aa	Known RBP	3.96	□□□□□ -1.78
UBC8	YEL012W	PSR1	Q07800	427 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	AKR2	Q12013	749 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	LEU9	Q12166	604 aa	Known RBP	3.96	□□□□□ -1.78
UBC8	YEL012W	TPO4	Q12256	659 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	YRM1	Q12340	786 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	ICT1	Q12385	394 aa		3.96	□□□□□ -1.78
UBC8	YEL012W	TEF1	P02994	458 aa	Known RBP	3.95	□□□□□ -1.78
UBC8	YEL012W	GCN4	P03069	281 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	ARD1	P07347	238 aa	Predicted RBP	3.95	□□□□□ -1.78
UBC8	YEL012W	IMA3	P0CW40	589 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	IMA4	P0CW41	589 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	STE50	P25344	346 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	MGT1	P26188	188 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	FAA1	P30624	700 aa	Known RBP	3.95	□□□□□ -1.78
UBC8	YEL012W	YHI9	P38765	294 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	GPI16	P38875	610 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	UIP3	P39547	235 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	TPA1	P40032	644 aa	Known RBP	3.95	□□□□□ -1.78
UBC8	YEL012W	STB2	P46679	850 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	GLO1	P50107	326 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	OCA1	P50946	238 aa	Predicted RBP	3.95	□□□□□ -1.78
UBC8	YEL012W	IST1	P53843	298 aa	Predicted RBP	3.95	□□□□□ -1.78
UBC8	YEL012W	PRO2	P54885	456 aa	Known RBP	3.95	□□□□□ -1.78
UBC8	YEL012W	YPL071C	Q02864	156 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	ROY1	Q04847	553 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	VPS38	Q05919	439 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	TPO3	Q06451	622 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	IMA2	Q08295	589 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	MMT2	Q08970	484 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	INP53	Q12271	1107 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	TAD3	Q9URQ3	322 aa		3.95	□□□□□ -1.78
UBC8	YEL012W	HXK2	P04807	486 aa	Known RBP	3.94	□□□□□ -1.78
UBC8	YEL012W	MRP2	P10663	115 aa	Predicted RBP	3.94	□□□□□ -1.78
UBC8	YEL012W	CLB1	P24868	471 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	YCR102C	P25608	368 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	PAP1	P29468	568 aa	Known RBP	3.94	□□□□□ -1.78
UBC8	YEL012W	SDH3	P33421	198 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	YPT52	P36018	234 aa	Known RBP	3.94	□□□□□ -1.78
UBC8	YEL012W	SRO77	P38163	1010 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	MMS21	P38632	267 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	EFM1	P38732	585 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	TDA11	P38854	504 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	VPS41	P38959	992 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	YEL057C	P39983	233 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	BUR6	P40096	142 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	CUP9	P41817	306 aa		3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms