RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	CHA1	P25379	360 aa	Known RBP	4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	IXR1	P33417	597 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	WBP1	P33767	430 aa	Known RBP	4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	PAN3	P36102	679 aa	Predicted RBP	4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	QNS1	P38795	714 aa	Known RBP	4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	POL31	P46957	487 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	MSB3	P48566	633 aa	Predicted RBP	4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	MSS11	Q03825	758 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	RAD30	Q04049	632 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	YMR087W	Q04299	284 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	NAT3	Q06504	195 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	YPR196W	Q06595	470 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	MNL2	Q12205	849 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	TPT1	Q12272	230 aa	Known RBP	4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	HTB1	P02293	131 aa	Known RBP	4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	HTB2	P02294	131 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	FCY2	P17064	533 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	ERD2	P18414	219 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	CAM1	P29547	415 aa	Known RBP	4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	PEX2	P32800	271 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	RIM2	P38127	377 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	LAG1	P38703	411 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	FAD1	P38913	306 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	AZF1	P41696	914 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	BRR6	P53062	197 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	YGL185C	P53100	379 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	ALG11	P53954	548 aa	Known RBP	4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	FMP42	Q04991	504 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	YLR177W	Q06251	628 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	TSC13	Q99190	310 aa		4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	GEA2	P39993	1459 aa	Known RBP	4.36	□□□□□ -1.71
YDR261C-D	YDR261C-D	BI4	P03879	638 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	SPE1	P08432	466 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	SGE1	P33335	543 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	EDC3	P39998	551 aa	Known RBP	4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	GAT2	P40209	560 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	RPL13B	P40212	199 aa	Known RBP	4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	YFL052W	P43551	465 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	YFR018C	P43599	363 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	NET1	P47035	1189 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	YGR250C	P53316	781 aa	Known RBP	4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	YOL036W	Q08206	761 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	YOL131W	Q08270	108 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	RPL13A	Q12690	199 aa	Predicted RBP	4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	REP2	P03872	296 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	YBR121C-A	P0C5L4	52 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	GLC3	P32775	704 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	BSD2	P38356	321 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	YFR045W	P43617	309 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	RSM10	Q03201	203 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	TDA9	Q04545	1251 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	ERP1	Q05359	219 aa	Known RBP	4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	DIB1	Q06819	143 aa	Predicted RBP	4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	POM33	Q12164	279 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	HUT1	Q12520	339 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	PHO5	P00635	467 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	LEU4	P06208	619 aa	Known RBP	4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	YNK1	P36010	153 aa	Known RBP	4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	YHR127W	P38833	243 aa	Known RBP	4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	STN1	P38960	494 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	TED1	P40533	473 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	NAS2	P40555	220 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	CAF16	P43569	289 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	AIM14	P53109	570 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	THG1	P53215	237 aa	Known RBP	4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	YKR011C	Q02209	353 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	YPL039W	Q03080	316 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	DCR2	Q05924	578 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	YPQ2	Q06328	317 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	APA2	P22108	325 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	SNC1	P31109	117 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	PPH3	P32345	308 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	ABD1	P32783	436 aa	Predicted RBP	4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	CHK1	P38147	527 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	ATF1	P40353	525 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	NTA1	P40354	457 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	SDP1	P40479	209 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	GPG1	P53130	126 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	ERV14	P53173	138 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	YCL001W-A	P87012	153 aa		4.35	□□□□□ -1.71
YDR261C-D	YDR261C-D	MYO4	P32492	1471 aa		4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	TDH2	P00358	332 aa	Known RBP	4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
YDR261C-D	YDR261C-D	PPR1	P07272	904 aa	Predicted RBP	4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	MET8	P15807	274 aa		4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	SLM5	P25345	492 aa	Known RBP	4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	VAC17	P25591	423 aa		4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	SRL3	P36167	246 aa		4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	YCR087C-A	P37263	153 aa		4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	SLM4	P38247	162 aa		4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	THI12	P42883	340 aa		4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	ASN2	P49090	572 aa	Known RBP	4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	CTR1	P49573	406 aa		4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	NMA111	P53920	997 aa		4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	MHR1	Q06630	226 aa		4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	MCH1	Q07376	486 aa		4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	YPL245W	Q12179	454 aa	Known RBP	4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	TOP3	P13099	656 aa		4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	CDC5	P32562	705 aa		4.34	□□□□□ -1.71
YDR261C-D	YDR261C-D	TCD2	P36101	447 aa	Known RBP	4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms