RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W VPS52P39904 641 aa3.84□□□□□ -1.79
HPR1YDR138W GUF1P46943 645 aa3.84□□□□□ -1.79
HPR1YDR138W GTO1P48239 356 aa3.84□□□□□ -1.79
HPR1YDR138W YDL186WP48568 277 aa3.84□□□□□ -1.79
HPR1YDR138W COS1P53822 381 aa3.84□□□□□ -1.79
HPR1YDR138W TIM44Q01852 431 aa3.84□□□□□ -1.79
HPR1YDR138W RSC9Q03124 581 aa3.84□□□□□ -1.79
HPR1YDR138W RLI1Q03195 608 aaKnown RBP3.84□□□□□ -1.79
HPR1YDR138W ARO80Q04052 950 aa3.84□□□□□ -1.79
HPR1YDR138W OSW1Q08692 278 aa3.84□□□□□ -1.79
HPR1YDR138W YDR262WQ12331 272 aa3.84□□□□□ -1.79
HPR1YDR138W LAG2Q92325 660 aa3.84□□□□□ -1.79
HPR1YDR138W RPN13O13563 156 aa3.83□□□□□ -1.8
HPR1YDR138W GID7P25569 745 aa3.83□□□□□ -1.8
HPR1YDR138W MEI4P29467 408 aa3.83□□□□□ -1.8
HPR1YDR138W MSK1P32048 576 aa3.83□□□□□ -1.8
HPR1YDR138W YPT52P36018 234 aaKnown RBP3.83□□□□□ -1.8
HPR1YDR138W PRP39P39682 629 aaKnown RBP3.83□□□□□ -1.8
HPR1YDR138W TOS3P43637 560 aa3.83□□□□□ -1.8
HPR1YDR138W BNA3P47039 444 aaKnown RBP3.83□□□□□ -1.8
HPR1YDR138W STE24P47154 453 aa3.83□□□□□ -1.8
HPR1YDR138W VMA10P48836 114 aaKnown RBP3.83□□□□□ -1.8
HPR1YDR138W YNL146WP53906 100 aa3.83□□□□□ -1.8
HPR1YDR138W RTT103Q05543 409 aa3.83□□□□□ -1.8
HPR1YDR138W DST1P07273 309 aa3.83□□□□□ -1.8
HPR1YDR138W CDC43P18898 376 aa3.83□□□□□ -1.8
HPR1YDR138W YAP1P19880 650 aaKnown RBP3.83□□□□□ -1.8
HPR1YDR138W CKI1P20485 582 aa3.83□□□□□ -1.8
HPR1YDR138W PDR3P33200 976 aa3.83□□□□□ -1.8
HPR1YDR138W SKN1P33336 771 aa3.83□□□□□ -1.8
HPR1YDR138W END3P39013 349 aa3.83□□□□□ -1.8
HPR1YDR138W ISC1P40015 477 aaKnown RBP3.83□□□□□ -1.8
HPR1YDR138W ATM1P40416 690 aa3.83□□□□□ -1.8
HPR1YDR138W AGE2P40529 298 aa3.83□□□□□ -1.8
HPR1YDR138W YIP1P53039 248 aa3.83□□□□□ -1.8
HPR1YDR138W YGL114WP53134 725 aa3.83□□□□□ -1.8
HPR1YDR138W NRD1P53617 575 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
HPR1YDR138W ATP23P53722 227 aa3.83□□□□□ -1.8
HPR1YDR138W YPL068CQ02749 293 aa3.83□□□□□ -1.8
HPR1YDR138W CTL1Q03220 320 aaKnown RBP3.83□□□□□ -1.8
HPR1YDR138W MRPS17Q03246 237 aaPredicted RBP3.83□□□□□ -1.8
HPR1YDR138W SPC2Q04969 178 aa3.83□□□□□ -1.8
HPR1YDR138W GMC2Q06201 188 aa3.83□□□□□ -1.8
HPR1YDR138W SEC10Q06245 871 aa3.83□□□□□ -1.8
HPR1YDR138W ASA1Q06822 443 aa3.83□□□□□ -1.8
HPR1YDR138W IRC10Q08118 586 aa3.83□□□□□ -1.8
HPR1YDR138W RPL42AP0CX27 106 aaKnown RBP3.82□□□□□ -1.8
HPR1YDR138W RPL42BP0CX28 106 aaKnown RBP3.82□□□□□ -1.8
HPR1YDR138W RPL18AP0CX49 186 aaKnown RBP3.82□□□□□ -1.8
HPR1YDR138W RPL18BP0CX50 186 aaKnown RBP3.82□□□□□ -1.8
HPR1YDR138W YPK2P18961 677 aa3.82□□□□□ -1.8
HPR1YDR138W POP7P38291 140 aa3.82□□□□□ -1.8
HPR1YDR138W FMP33P46998 180 aa3.82□□□□□ -1.8
HPR1YDR138W HMS2P47175 358 aa3.82□□□□□ -1.8
HPR1YDR138W FRE4P53746 719 aa3.82□□□□□ -1.8
HPR1YDR138W ESBP6P53918 673 aa3.82□□□□□ -1.8
HPR1YDR138W YMR310CQ04867 317 aaPredicted RBP3.82□□□□□ -1.8
HPR1YDR138W SYO1Q07395 620 aa3.82□□□□□ -1.8
HPR1YDR138W NRT1Q08485 598 aa3.82□□□□□ -1.8
HPR1YDR138W SKI7Q08491 747 aaPredicted RBP3.82□□□□□ -1.8
HPR1YDR138W SRL2Q12020 392 aa3.82□□□□□ -1.8
HPR1YDR138W RRP12Q12754 1228 aaKnown RBP3.82□□□□□ -1.8
HPR1YDR138W FSH3Q99369 266 aa3.82□□□□□ -1.8
HPR1YDR138W ICL1P28240 557 aaPredicted RBP3.82□□□□□ -1.8
HPR1YDR138W SSO1P32867 290 aa3.82□□□□□ -1.8
HPR1YDR138W CSE1P33307 960 aa3.82□□□□□ -1.8
HPR1YDR138W RTS2P40962 232 aa3.82□□□□□ -1.8
HPR1YDR138W CGR1P53188 120 aa3.82□□□□□ -1.8
HPR1YDR138W SAM50P53969 484 aa3.82□□□□□ -1.8
HPR1YDR138W CSI1Q04368 295 aa3.82□□□□□ -1.8
HPR1YDR138W YLL056CQ12177 298 aa3.82□□□□□ -1.8
HPR1YDR138W CMC2Q3E7A4 109 aa3.82□□□□□ -1.8
HPR1YDR138W SSC1P0CS90 654 aaKnown RBP3.81□□□□□ -1.8
HPR1YDR138W YER190C-BP0CX94 160 aa3.81□□□□□ -1.8
HPR1YDR138W YEL077W-AP0CX95 160 aa3.81□□□□□ -1.8
HPR1YDR138W YGR296C-BP0CX96 160 aa3.81□□□□□ -1.8
HPR1YDR138W YPL283W-BP0CX97 160 aa3.81□□□□□ -1.8
HPR1YDR138W YPR204C-AP0CX98 160 aa3.81□□□□□ -1.8
HPR1YDR138W YKL162CP36052 402 aa3.81□□□□□ -1.8
HPR1YDR138W YCR041WP37265 110 aa3.81□□□□□ -1.8
HPR1YDR138W YRB2P40517 327 aa3.81□□□□□ -1.8
HPR1YDR138W ALB1P47019 175 aaPredicted RBP3.81□□□□□ -1.8
HPR1YDR138W MDV1P47025 714 aa3.81□□□□□ -1.8
HPR1YDR138W YHC3P47040 408 aa3.81□□□□□ -1.8
HPR1YDR138W LIA1P47120 325 aaKnown RBP3.81□□□□□ -1.8
HPR1YDR138W LSG1P53145 640 aaKnown RBP3.81□□□□□ -1.8
HPR1YDR138W TIM21P53220 239 aa3.81□□□□□ -1.8
HPR1YDR138W KTR6P54070 446 aa3.81□□□□□ -1.8
HPR1YDR138W RPL15BP54780 204 aaPredicted RBP3.81□□□□□ -1.8
HPR1YDR138W SEG1Q04279 960 aa3.81□□□□□ -1.8
HPR1YDR138W KRE28Q04431 385 aa3.81□□□□□ -1.8
HPR1YDR138W AAD15Q08361 143 aa3.81□□□□□ -1.8
HPR1YDR138W DCP1Q12517 231 aaPredicted RBP3.81□□□□□ -1.8
HPR1YDR138W STE2D6VTK4 431 aa3.81□□□□□ -1.8
HPR1YDR138W ARG80P07249 177 aa3.81□□□□□ -1.8
HPR1YDR138W SSA3P09435 649 aaKnown RBP3.81□□□□□ -1.8
HPR1YDR138W UTR1P21373 530 aa3.81□□□□□ -1.8
HPR1YDR138W ISY1P21374 235 aaPredicted RBP3.81□□□□□ -1.8
HPR1YDR138W MXR2P25566 168 aa3.81□□□□□ -1.8
HPR1YDR138W MSN4P33749 630 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms