RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C PAM18Q07914 168 aa4.04□□□□□ -1.76
CDC9YDL164C YPR053CQ6Q5F3 151 aa4.04□□□□□ -1.76
CDC9YDL164C FAR1P21268 830 aa4.04□□□□□ -1.76
CDC9YDL164C FUN19P28003 413 aaPredicted RBP4.04□□□□□ -1.76
CDC9YDL164C DBP8P38719 431 aa4.04□□□□□ -1.76
CDC9YDL164C QRI1P43123 477 aaKnown RBP4.04□□□□□ -1.76
CDC9YDL164C HIT1P46973 164 aa4.04□□□□□ -1.76
CDC9YDL164C SNU56Q03782 492 aaKnown RBP4.04□□□□□ -1.76
CDC9YDL164C CAC2Q04199 468 aa4.04□□□□□ -1.76
CDC9YDL164C ACK1Q07622 623 aaPredicted RBP4.04□□□□□ -1.76
CDC9YDL164C SRO7Q12038 1033 aa4.04□□□□□ -1.76
CDC9YDL164C SEC3P33332 1336 aaKnown RBP4.03□□□□□ -1.76
CDC9YDL164C ECM5Q03214 1411 aa4.03□□□□□ -1.76
CDC9YDL164C MSB1P21339 1137 aaKnown RBP4.03□□□□□ -1.76
CDC9YDL164C RAD24P32641 659 aa4.03□□□□□ -1.76
CDC9YDL164C MIA40P36046 403 aa4.03□□□□□ -1.76
CDC9YDL164C YMR134WP40207 237 aa4.03□□□□□ -1.76
CDC9YDL164C NAS6P50086 228 aa4.03□□□□□ -1.76
CDC9YDL164C DIG1Q03063 452 aaKnown RBP4.03□□□□□ -1.76
CDC9YDL164C SPO77Q06134 477 aa4.03□□□□□ -1.76
CDC9YDL164C BTS1Q12051 335 aa4.03□□□□□ -1.76
CDC9YDL164C CYS4P32582 507 aaKnown RBP4.02□□□□□ -1.77
CDC9YDL164C COA1P40452 197 aa4.02□□□□□ -1.77
CDC9YDL164C YCH1P42937 148 aa4.02□□□□□ -1.77
CDC9YDL164C LOH1P47055 219 aa4.02□□□□□ -1.77
CDC9YDL164C MPS1P54199 764 aa4.02□□□□□ -1.77
CDC9YDL164C SMP3Q04174 516 aa4.02□□□□□ -1.77
CDC9YDL164C DCR2Q05924 578 aa4.02□□□□□ -1.77
CDC9YDL164C YMR085WP0CF18 432 aa4.02□□□□□ -1.77
CDC9YDL164C SNF3P10870 884 aa4.02□□□□□ -1.77
CDC9YDL164C CSM1P25651 190 aa4.02□□□□□ -1.77
CDC9YDL164C YAL037WP39728 267 aa4.02□□□□□ -1.77
CDC9YDL164C PCL6P40038 420 aa4.02□□□□□ -1.77
CDC9YDL164C UTP25P40498 721 aaKnown RBP4.02□□□□□ -1.77
CDC9YDL164C PMT6P42934 759 aa4.02□□□□□ -1.77
CDC9YDL164C IMD3P50095 523 aaKnown RBP4.02□□□□□ -1.77
CDC9YDL164C YGL117WP53133 265 aa4.02□□□□□ -1.77
CDC9YDL164C COG2P53271 262 aa4.02□□□□□ -1.77
CDC9YDL164C SLI1P53304 468 aa4.02□□□□□ -1.77
CDC9YDL164C YDR387CQ04162 555 aa4.02□□□□□ -1.77
CDC9YDL164C DLT1Q04216 342 aa4.02□□□□□ -1.77
CDC9YDL164C YDR222WQ04925 415 aa4.02□□□□□ -1.77
CDC9YDL164C CDD1Q06549 142 aa4.02□□□□□ -1.77
CDC9YDL164C THP2O13539 261 aaKnown RBP4.01□□□□□ -1.77
CDC9YDL164C TRP3P00937 484 aa4.01□□□□□ -1.77
CDC9YDL164C BAR1P12630 587 aa4.01□□□□□ -1.77
CDC9YDL164C TYR1P20049 452 aa4.01□□□□□ -1.77
CDC9YDL164C ECM25P32525 599 aa4.01□□□□□ -1.77
CDC9YDL164C PRP18P33411 251 aaPredicted RBP4.01□□□□□ -1.77
CDC9YDL164C MRPS5P33759 307 aa4.01□□□□□ -1.77
CDC9YDL164C CBT1P36038 271 aaPredicted RBP4.01□□□□□ -1.77
CDC9YDL164C HIS2P38635 335 aa4.01□□□□□ -1.77
CDC9YDL164C PCF11P39081 626 aaPredicted RBP4.01□□□□□ -1.77
CDC9YDL164C EXO1P39875 702 aa4.01□□□□□ -1.77
CDC9YDL164C ERG28P40030 148 aa4.01□□□□□ -1.77
CDC9YDL164C SIM1P40472 476 aa4.01□□□□□ -1.77
CDC9YDL164C COS1P53822 381 aa4.01□□□□□ -1.77
CDC9YDL164C YNL247WP53852 767 aaKnown RBP4.01□□□□□ -1.77
CDC9YDL164C GPI15P53961 229 aa4.01□□□□□ -1.77
CDC9YDL164C MUK1Q02866 612 aa4.01□□□□□ -1.77
CDC9YDL164C YOR338WQ99326 363 aa4.01□□□□□ -1.77
CDC9YDL164C YLL053CP0CD98 152 aa4.01□□□□□ -1.77
CDC9YDL164C COQ1P18900 473 aa4.01□□□□□ -1.77
CDC9YDL164C SPS19P32573 292 aaKnown RBP4.01□□□□□ -1.77
CDC9YDL164C GCG1P32656 232 aaKnown RBP4.01□□□□□ -1.77
CDC9YDL164C UBC6P33296 250 aaPredicted RBP4.01□□□□□ -1.77
CDC9YDL164C HIS7P33734 552 aaKnown RBP4.01□□□□□ -1.77
CDC9YDL164C MAL32P38158 584 aa4.01□□□□□ -1.77
CDC9YDL164C YER079WP40052 210 aaKnown RBP4.01□□□□□ -1.77
CDC9YDL164C BTT1P40314 149 aaPredicted RBP4.01□□□□□ -1.77
CDC9YDL164C TIS11P47977 285 aa4.01□□□□□ -1.77
CDC9YDL164C CWC23P52868 283 aaPredicted RBP4.01□□□□□ -1.77
CDC9YDL164C MAL12P53341 584 aa4.01□□□□□ -1.77
CDC9YDL164C ASA1Q06822 443 aa4.01□□□□□ -1.77
CDC9YDL164C YOL075CQ08234 1294 aa4.01□□□□□ -1.77
CDC9YDL164C ENB1Q08299 606 aa4.01□□□□□ -1.77
CDC9YDL164C AAD15Q08361 143 aa4.01□□□□□ -1.77
CDC9YDL164C KSS1P14681 368 aa4□□□□□ -1.77
CDC9YDL164C SAC1P32368 623 aaKnown RBP4□□□□□ -1.77
CDC9YDL164C VAM7P32912 316 aa4□□□□□ -1.77
CDC9YDL164C MYO3P36006 1272 aa4□□□□□ -1.77
CDC9YDL164C APL3P38065 1025 aa4□□□□□ -1.77
CDC9YDL164C YMC2P38087 329 aa4□□□□□ -1.77
CDC9YDL164C MTW1P39731 289 aa4□□□□□ -1.77
CDC9YDL164C NOP19P53317 196 aaPredicted RBP4□□□□□ -1.77
CDC9YDL164C PFA5Q03289 374 aa4□□□□□ -1.77
CDC9YDL164C MSL5Q12186 476 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
CDC9YDL164C GDH2P33327 1092 aaKnown RBP4□□□□□ -1.77
CDC9YDL164C DTR1P38125 572 aa4□□□□□ -1.77
CDC9YDL164C LEU5P38702 357 aa4□□□□□ -1.77
CDC9YDL164C SNL1P40548 159 aa4□□□□□ -1.77
CDC9YDL164C SSK22P25390 1331 aaPredicted RBP3.99□□□□□ -1.77
CDC9YDL164C PPR1P07272 904 aaPredicted RBP3.99□□□□□ -1.77
CDC9YDL164C MATALPHA2P0CY08 210 aa3.99□□□□□ -1.77
CDC9YDL164C HMLALPHA2P0CY09 210 aa3.99□□□□□ -1.77
CDC9YDL164C HEM15P16622 393 aa3.99□□□□□ -1.77
CDC9YDL164C MIC12P38341 106 aa3.99□□□□□ -1.77
CDC9YDL164C YER184CP39961 794 aa3.99□□□□□ -1.77
CDC9YDL164C LAS21P40367 830 aa3.99□□□□□ -1.77
CDC9YDL164C SCD6P45978 349 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms