RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	RIM1	P32445	135 aa	Known RBP	3.57	□□□□□ -1.84
UBS1	YBR165W	INM1	P38710	295 aa		3.57	□□□□□ -1.84
UBS1	YBR165W	MMF1	P40185	145 aa	Known RBP	3.57	□□□□□ -1.84
UBS1	YBR165W	YPS5	P53057	165 aa		3.57	□□□□□ -1.84
UBS1	YBR165W	YLR456W	Q06199	204 aa		3.57	□□□□□ -1.84
UBS1	YBR165W	UAF30	Q08747	228 aa		3.57	□□□□□ -1.84
UBS1	YBR165W	YCR024C-B	Q3E7Z8	88 aa		3.57	□□□□□ -1.84
UBS1	YBR165W	SKT5	P34226	696 aa		3.56	□□□□□ -1.84
UBS1	YBR165W	ZIM17	P42844	174 aa		3.56	□□□□□ -1.84
UBS1	YBR165W	STE24	P47154	453 aa		3.56	□□□□□ -1.84
UBS1	YBR165W	YGR018C	P53211	109 aa		3.56	□□□□□ -1.84
UBS1	YBR165W	RRP46	P53256	223 aa	Predicted RBP	3.56	□□□□□ -1.84
UBS1	YBR165W	YPR091C	Q06833	770 aa		3.56	□□□□□ -1.84
UBS1	YBR165W	NSE1	Q07913	336 aa		3.56	□□□□□ -1.84
UBS1	YBR165W	FAB1	P34756	2278 aa		3.56	□□□□□ -1.84
UBS1	YBR165W	FUN26	P31381	517 aa		3.55	□□□□□ -1.84
UBS1	YBR165W	RAD5	P32849	1169 aa	Predicted RBP	3.55	□□□□□ -1.84
UBS1	YBR165W	GPI18	P38211	433 aa		3.55	□□□□□ -1.84
UBS1	YBR165W	YNL208W	P40159	199 aa	Known RBP	3.55	□□□□□ -1.84
UBS1	YBR165W	YGR111W	P53265	400 aa		3.55	□□□□□ -1.84
UBS1	YBR165W	SPR6	Q01684	191 aa		3.55	□□□□□ -1.84
UBS1	YBR165W	PRP3	Q03338	469 aa	Predicted RBP	3.55	□□□□□ -1.84
UBS1	YBR165W	ECM11	Q04110	302 aa		3.55	□□□□□ -1.84
UBS1	YBR165W	ADH1	P00330	348 aa	Known RBP	3.54	□□□□□ -1.84
UBS1	YBR165W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
UBS1	YBR165W	ZRC1	P20107	442 aa		3.54	□□□□□ -1.84
UBS1	YBR165W	COX13	P32799	129 aa		3.54	□□□□□ -1.84
UBS1	YBR165W	GPI16	P38875	610 aa		3.54	□□□□□ -1.84
UBS1	YBR165W	AIM32	Q04689	311 aa		3.54	□□□□□ -1.84
UBS1	YBR165W	FCY22	Q12119	530 aa		3.54	□□□□□ -1.84
UBS1	YBR165W	DEP1	P31385	405 aa		3.53	□□□□□ -1.84
UBS1	YBR165W	MCR1	P36060	302 aa	Known RBP	3.53	□□□□□ -1.84
UBS1	YBR165W	SLX1	P38324	304 aa		3.53	□□□□□ -1.84
UBS1	YBR165W	TIM17	P39515	158 aa		3.53	□□□□□ -1.84
UBS1	YBR165W	TOS2	P50078	622 aa		3.53	□□□□□ -1.84
UBS1	YBR165W	PIB2	P53191	635 aa		3.53	□□□□□ -1.84
UBS1	YBR165W	RRN9	P53437	365 aa		3.53	□□□□□ -1.84
UBS1	YBR165W	TPS1	Q00764	495 aa	Known RBP	3.53	□□□□□ -1.84
UBS1	YBR165W	RNH203	Q12338	110 aa		3.53	□□□□□ -1.84
UBS1	YBR165W	ISA2	Q12425	185 aa		3.53	□□□□□ -1.84
UBS1	YBR165W	HTZ1	Q12692	134 aa	Known RBP	3.53	□□□□□ -1.84
UBS1	YBR165W	RPL12A	P0CX53	165 aa	Known RBP	3.52	□□□□□ -1.85
UBS1	YBR165W	RPL12B	P0CX54	165 aa		3.52	□□□□□ -1.85
UBS1	YBR165W	DBF4	P32325	704 aa		3.52	□□□□□ -1.85
UBS1	YBR165W	GPX2	P38143	162 aa		3.52	□□□□□ -1.85
UBS1	YBR165W	FAD1	P38913	306 aa		3.52	□□□□□ -1.85
UBS1	YBR165W	IES4	Q08561	116 aa		3.52	□□□□□ -1.85
UBS1	YBR165W	LTV1	P34078	463 aa		3.51	□□□□□ -1.85
UBS1	YBR165W	MRPL27	P36526	146 aa	Predicted RBP	3.51	□□□□□ -1.85
UBS1	YBR165W	AIP1	P46680	615 aa	Known RBP	3.51	□□□□□ -1.85
UBS1	YBR165W	YOP1	Q12402	180 aa		3.51	□□□□□ -1.85
UBS1	YBR165W	YDL199C	Q12407	687 aa		3.51	□□□□□ -1.85
UBS1	YBR165W	CCH1	P50077	2039 aa		3.51	□□□□□ -1.85
UBS1	YBR165W	DPH2	P32461	534 aa		3.5	□□□□□ -1.85
UBS1	YBR165W	TOA2	P32774	122 aa		3.5	□□□□□ -1.85
UBS1	YBR165W	QDR3	P38227	689 aa		3.5	□□□□□ -1.85
UBS1	YBR165W	IGD1	P43598	195 aa		3.5	□□□□□ -1.85
UBS1	YBR165W	YGL262W	P53054	175 aa		3.5	□□□□□ -1.85
UBS1	YBR165W	KTR6	P54070	446 aa		3.5	□□□□□ -1.85
UBS1	YBR165W	NDL1	Q06568	189 aa		3.5	□□□□□ -1.85
UBS1	YBR165W	DCI1	Q08558	271 aa		3.5	□□□□□ -1.85
UBS1	YBR165W	FOL3	Q12676	427 aa	Predicted RBP	3.5	□□□□□ -1.85
UBS1	YBR165W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.49	□□□□□ -1.85	not detected
UBS1	YBR165W	ATM1	P40416	690 aa		3.49	□□□□□ -1.85
UBS1	YBR165W	PMT5	P52867	743 aa		3.49	□□□□□ -1.85
UBS1	YBR165W	VHT1	P53241	593 aa		3.49	□□□□□ -1.85
UBS1	YBR165W	URC2	Q04411	772 aa		3.49	□□□□□ -1.85
UBS1	YBR165W	ECM7	Q06200	448 aa		3.49	□□□□□ -1.85
UBS1	YBR165W	PIN3	Q06449	215 aa		3.49	□□□□□ -1.85
UBS1	YBR165W	STE7	P06784	515 aa		3.48	□□□□□ -1.85
UBS1	YBR165W	ARF1	P11076	181 aa	Known RBP	3.48	□□□□□ -1.85
UBS1	YBR165W	ECT1	P33412	323 aa		3.48	□□□□□ -1.85
UBS1	YBR165W	TIR2	P33890	251 aa		3.48	□□□□□ -1.85
UBS1	YBR165W	LSM12	P38828	187 aa	Known RBP	3.48	□□□□□ -1.85
UBS1	YBR165W	PFS1	P38872	237 aa		3.48	□□□□□ -1.85
UBS1	YBR165W	PAC11	P40960	533 aa		3.48	□□□□□ -1.85
UBS1	YBR165W	KEG1	P43614	200 aa		3.48	□□□□□ -1.85
UBS1	YBR165W	FLC3	P53121	802 aa		3.48	□□□□□ -1.85
UBS1	YBR165W	TRM112	P53738	135 aa	Predicted RBP	3.48	□□□□□ -1.85
UBS1	YBR165W	MCT1	Q12283	360 aa		3.48	□□□□□ -1.85
UBS1	YBR165W	PCL9	Q12477	304 aa		3.48	□□□□□ -1.85
UBS1	YBR165W	OPI3	P05375	206 aa		3.47	□□□□□ -1.85
UBS1	YBR165W	TPK3	P05986	398 aa		3.47	□□□□□ -1.85
UBS1	YBR165W	SLM5	P25345	492 aa	Known RBP	3.47	□□□□□ -1.85
UBS1	YBR165W	GIT1	P25346	518 aa		3.47	□□□□□ -1.85
UBS1	YBR165W	PHO91	P27514	894 aa		3.47	□□□□□ -1.85
UBS1	YBR165W	SPO23	P33757	523 aa		3.47	□□□□□ -1.85
UBS1	YBR165W	GEP4	P38812	185 aa		3.47	□□□□□ -1.85
UBS1	YBR165W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.47	□□□□□ -1.85	not detected
UBS1	YBR165W	YSC83	P32792	385 aa		3.46	□□□□□ -1.86
UBS1	YBR165W	DOA1	P36037	715 aa		3.46	□□□□□ -1.86
UBS1	YBR165W	ECM8	P38246	354 aa		3.46	□□□□□ -1.86
UBS1	YBR165W	ABM1	P47146	123 aa		3.46	□□□□□ -1.86
UBS1	YBR165W	YIP5	P53108	310 aa		3.46	□□□□□ -1.86
UBS1	YBR165W	ROG1	P53118	685 aa		3.46	□□□□□ -1.86
UBS1	YBR165W	YHC1	Q05900	231 aa	Known RBP	3.46	□□□□□ -1.86
UBS1	YBR165W	NOP6	Q07623	225 aa	Known RBP	3.46	□□□□□ -1.86
UBS1	YBR165W	GPM3	Q12326	303 aa		3.46	□□□□□ -1.86
UBS1	YBR165W	MEX67	Q99257	599 aa	Known RBP	3.46	□□□□□ -1.86
UBS1	YBR165W	YDR541C	Q03049	344 aa		3.45	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms