RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C PDX3P38075 228 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C TSC10P38342 320 aa2.2□□□□□ -2.06
CLN3YAL040C YHR097CP38809 366 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C HAT2P39984 401 aa2.2□□□□□ -2.06
CLN3YAL040C HEM14P40012 539 aa2.2□□□□□ -2.06
CLN3YAL040C OSW5P40219 148 aa2.2□□□□□ -2.06
CLN3YAL040C ALG5P40350 334 aa2.2□□□□□ -2.06
CLN3YAL040C MAM33P40513 266 aa2.2□□□□□ -2.06
CLN3YAL040C YPT32P51996 222 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C NBP35P52920 328 aa2.2□□□□□ -2.06
CLN3YAL040C CLD1P53264 445 aa2.2□□□□□ -2.06
CLN3YAL040C YTP1P53584 459 aa2.2□□□□□ -2.06
CLN3YAL040C CUS2P53830 285 aaPredicted RBP2.2□□□□□ -2.06
CLN3YAL040C PRM1P53835 661 aa2.2□□□□□ -2.06
CLN3YAL040C IBD2P53892 351 aa2.2□□□□□ -2.06
CLN3YAL040C EFM6P53970 246 aa2.2□□□□□ -2.06
CLN3YAL040C AAT1Q01802 451 aa2.2□□□□□ -2.06
CLN3YAL040C TOF2Q02208 771 aa2.2□□□□□ -2.06
CLN3YAL040C SPP2Q02521 185 aa2.2□□□□□ -2.06
CLN3YAL040C YPL014WQ02606 381 aa2.2□□□□□ -2.06
CLN3YAL040C RRN5Q02983 363 aa2.2□□□□□ -2.06
CLN3YAL040C YPR114WQ06107 315 aa2.2□□□□□ -2.06
CLN3YAL040C SNX3Q08826 162 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C YLR049CQ12110 428 aa2.2□□□□□ -2.06
CLN3YAL040C PST1Q12355 444 aa2.2□□□□□ -2.06
CLN3YAL040C SEC39Q12745 709 aa2.2□□□□□ -2.06
CLN3YAL040C YKL033W-AQ86ZR7 236 aa2.2□□□□□ -2.06
CLN3YAL040C CAR1P00812 333 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C ARG81P05085 880 aa2.2□□□□□ -2.06
CLN3YAL040C CDC21P06785 304 aa2.2□□□□□ -2.06
CLN3YAL040C DST1P07273 309 aa2.2□□□□□ -2.06
CLN3YAL040C MSF1P08425 469 aa2.2□□□□□ -2.06
CLN3YAL040C RPL1AP0CX43 217 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C RPL1BP0CX44 217 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C BUB2P26448 306 aaPredicted RBP2.2□□□□□ -2.06
CLN3YAL040C PHO91P27514 894 aa2.2□□□□□ -2.06
CLN3YAL040C ZIP1P31111 875 aa2.2□□□□□ -2.06
CLN3YAL040C PRP18P33411 251 aaPredicted RBP2.2□□□□□ -2.06
CLN3YAL040C HES1P35843 434 aa2.2□□□□□ -2.06
CLN3YAL040C CMC1P36064 111 aa2.2□□□□□ -2.06
CLN3YAL040C AUR1P36107 401 aaPredicted RBP2.2□□□□□ -2.06
CLN3YAL040C PIM1P36775 1133 aa2.2□□□□□ -2.06
CLN3YAL040C YHB1P39676 399 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C UTP18P40362 594 aaPredicted RBP2.2□□□□□ -2.06
CLN3YAL040C MOB1P40484 314 aa2.2□□□□□ -2.06
CLN3YAL040C SER33P40510 469 aa2.2□□□□□ -2.06
CLN3YAL040C AGX1P43567 385 aa2.2□□□□□ -2.06
CLN3YAL040C ALK1P43633 760 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C GLG2P47011 380 aa2.2□□□□□ -2.06
CLN3YAL040C COG7P53195 279 aa2.2□□□□□ -2.06
CLN3YAL040C EFM5P53200 248 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C TWF1P53250 332 aa2.2□□□□□ -2.06
CLN3YAL040C COG2P53271 262 aa2.2□□□□□ -2.06
CLN3YAL040C IPI3P53877 555 aa2.2□□□□□ -2.06
CLN3YAL040C YNL010WP53981 241 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C CTK1Q03957 528 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C YDR109CQ04585 715 aa2.2□□□□□ -2.06
CLN3YAL040C VTA1Q06263 330 aa2.2□□□□□ -2.06
CLN3YAL040C PML1Q07930 204 aaPredicted RBP2.2□□□□□ -2.06
CLN3YAL040C BUD7Q08754 746 aa2.2□□□□□ -2.06
CLN3YAL040C SWT1Q12104 458 aa2.2□□□□□ -2.06
CLN3YAL040C LYS21Q12122 440 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C LEU9Q12166 604 aaKnown RBP2.2□□□□□ -2.06
CLN3YAL040C POM34Q12445 299 aa2.2□□□□□ -2.06
CLN3YAL040C YKL018C-AQ3E7A7 99 aa2.2□□□□□ -2.06
CLN3YAL040C TRA1P38811 3744 aa2.19□□□□□ -2.06
CLN3YAL040C SUC2P00724 532 aa2.19□□□□□ -2.06
CLN3YAL040C RPL6BP05739 176 aaKnown RBP2.19□□□□□ -2.06
CLN3YAL040C RPS14AP06367 137 aaKnown RBP2.19□□□□□ -2.06
CLN3YAL040C ARD1P07347 238 aaPredicted RBP2.19□□□□□ -2.06
CLN3YAL040C COS2P0CX12 379 aa2.19□□□□□ -2.06
CLN3YAL040C COS3P0CX13 379 aa2.19□□□□□ -2.06
CLN3YAL040C SEC12P11655 471 aa2.19□□□□□ -2.06
CLN3YAL040C RNA1P11745 407 aaKnown RBP2.19□□□□□ -2.06
CLN3YAL040C DAP2P18962 818 aa2.19□□□□□ -2.06
CLN3YAL040C RPB4P20433 221 aaPredicted RBP2.19□□□□□ -2.06
CLN3YAL040C VPS33P20795 691 aa2.19□□□□□ -2.06
CLN3YAL040C GRR1P24814 1151 aa2.19□□□□□ -2.06
CLN3YAL040C YCR061WP25639 631 aa2.19□□□□□ -2.06
CLN3YAL040C PPZ1P26570 692 aa2.19□□□□□ -2.06
CLN3YAL040C ERV1P27882 189 aa2.19□□□□□ -2.06
CLN3YAL040C PRE2P30656 287 aaKnown RBP2.19□□□□□ -2.06
CLN3YAL040C AFG1P32317 509 aa2.19□□□□□ -2.06
CLN3YAL040C ATP11P32453 318 aa2.19□□□□□ -2.06
CLN3YAL040C SRB5P32585 307 aa2.19□□□□□ -2.06
CLN3YAL040C SEF1P34228 1148 aa2.19□□□□□ -2.06
CLN3YAL040C MAK5P38112 773 aaPredicted RBP2.19□□□□□ -2.06
CLN3YAL040C TAE1P38340 232 aa2.19□□□□□ -2.06
CLN3YAL040C YHR112CP38716 378 aa2.19□□□□□ -2.06
CLN3YAL040C BZZ1P38822 633 aa2.19□□□□□ -2.06
CLN3YAL040C RPS14BP39516 138 aaKnown RBP2.19□□□□□ -2.06
CLN3YAL040C FRT2P39734 528 aa2.19□□□□□ -2.06
CLN3YAL040C PKP1P40530 394 aa2.19□□□□□ -2.06
CLN3YAL040C IME4P41833 600 aa2.19□□□□□ -2.06
CLN3YAL040C MEP2P41948 499 aa2.19□□□□□ -2.06
CLN3YAL040C COS4P43542 379 aa2.19□□□□□ -2.06
CLN3YAL040C PYK2P52489 506 aaKnown RBP2.19□□□□□ -2.06
CLN3YAL040C MIG2P53035 382 aa2.19□□□□□ -2.06
CLN3YAL040C ATG4P53867 494 aa2.19□□□□□ -2.06
CLN3YAL040C RPL6AQ02326 176 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms