RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 BEX3Q00994 111 aa19.52■□□□□ 0.71
PHGDH-230ENST00000641927 MCM6Q14566 821 aa19.52■□□□□ 0.71
PHGDH-230ENST00000641927 KANK3Q6NY19 840 aa19.52■□□□□ 0.71
PHGDH-230ENST00000641927 C4orf19Q8IY42 314 aa19.52■□□□□ 0.71
PHGDH-230ENST00000641927 GRAMD1CQ8IYS0 662 aa19.52■□□□□ 0.71
PHGDH-230ENST00000641927 PCYT2Q99447 389 aa19.52■□□□□ 0.71
PHGDH-230ENST00000641927 TNMDQ9H2S6 317 aa19.52■□□□□ 0.71
PHGDH-230ENST00000641927 CLSTN2Q9H4D0 955 aa19.52■□□□□ 0.71
PHGDH-230ENST00000641927 XPNPEP3Q9NQH7 507 aa19.52■□□□□ 0.71
PHGDH-230ENST00000641927 BLOC1S4Q9NUP1 217 aa19.52■□□□□ 0.71
PHGDH-230ENST00000641927 HOOK1Q9UJC3 728 aaKnown RBP19.52■□□□□ 0.71
PHGDH-230ENST00000641927 MAFBQ9Y5Q3 323 aaPredicted RBP19.52■□□□□ 0.71
PHGDH-230ENST00000641927 SYNRGQ9UMZ2 1314 aa19.51■□□□□ 0.71
PHGDH-230ENST00000641927 PGK1P00558 417 aa19.51■□□□□ 0.71
PHGDH-230ENST00000641927 ZNF286BP0CG31 522 aa19.51■□□□□ 0.71
PHGDH-230ENST00000641927 IRX5P78411 483 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-230ENST00000641927 PRKCEQ02156 737 aa19.51■□□□□ 0.71
PHGDH-230ENST00000641927 FSCN1Q16658 493 aaKnown RBP19.51■□□□□ 0.71
PHGDH-230ENST00000641927 CCDC183Q5T5S1 534 aa19.51■□□□□ 0.71
PHGDH-230ENST00000641927 SV2BQ7L1I2 683 aa19.51■□□□□ 0.71
PHGDH-230ENST00000641927 SMARCAD1Q9H4L7 1026 aa19.51■□□□□ 0.71
PHGDH-230ENST00000641927 TMEM63CQ9P1W3 806 aa19.51■□□□□ 0.71
PHGDH-230ENST00000641927 A6NJR5 290 aa19.5■□□□□ 0.71
PHGDH-230ENST00000641927 ZNF862O60290 1169 aa19.5■□□□□ 0.71
PHGDH-230ENST00000641927 LGR5O75473 907 aa19.5■□□□□ 0.71
PHGDH-230ENST00000641927 LGALS2P05162 132 aa19.5■□□□□ 0.71
PHGDH-230ENST00000641927 PLA2G4BP0C869 781 aa19.5■□□□□ 0.71
PHGDH-230ENST00000641927 KCTD17Q8N5Z5 321 aa19.5■□□□□ 0.71
PHGDH-230ENST00000641927 AFAP1L1Q8TED9 768 aa19.5■□□□□ 0.71
PHGDH-230ENST00000641927 PAGE5Q96GU1 130 aa19.5■□□□□ 0.71
PHGDH-230ENST00000641927 BHMT2Q9H2M3 363 aa19.5■□□□□ 0.71
PHGDH-230ENST00000641927 MAGEF1Q9HAY2 307 aa19.5■□□□□ 0.71
PHGDH-230ENST00000641927 SEPT9Q9UHD8 586 aaPredicted RBP19.5■□□□□ 0.71
PHGDH-230ENST00000641927 EMSYQ7Z589 1322 aa19.5■□□□□ 0.71
PHGDH-230ENST00000641927 TMEM150BA6NC51 233 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 LYPLA2O95372 231 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 EYA4O95677 639 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 MYL3P08590 195 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 GJA9P57773 515 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 GNASQ5JWF2 1037 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 FBXO46Q6PJ61 603 aaPredicted RBP19.49■□□□□ 0.71
PHGDH-230ENST00000641927 OTUD6AQ7L8S5 288 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 PLPPR4Q7Z2D5 763 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 ERAP1Q9NZ08 941 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 ZNF215Q9UL58 517 aaPredicted RBP19.49■□□□□ 0.71
PHGDH-230ENST00000641927 ARHGEF35A5YM69 484 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 MSCO60682 206 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 OATP04181 439 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 CHMP4BP1P59074 171 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 AMPD3Q01432 767 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 POSTNQ15063 836 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 PKN2Q16513 984 aaKnown RBP19.49■□□□□ 0.71
PHGDH-230ENST00000641927 XKR3Q5GH77 459 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 PLA2G4FQ68DD2 849 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 SH2D3AQ9BRG2 576 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.49■□□□□ 0.715e-8■■□□□ 14.4
PHGDH-230ENST00000641927 GZF1Q9H116 711 aaPredicted RBP19.49■□□□□ 0.71
PHGDH-230ENST00000641927 KBTBD4Q9NVX7 518 aa19.49■□□□□ 0.71
PHGDH-230ENST00000641927 MYH9P35579 1960 aaKnown RBP19.48■□□□□ 0.71
PHGDH-230ENST00000641927 MYADML2A6NDP7 307 aa19.48■□□□□ 0.71
PHGDH-230ENST00000641927 ATP4AP20648 1035 aa19.48■□□□□ 0.71
PHGDH-230ENST00000641927 PNOCQ13519 176 aa19.48■□□□□ 0.71
PHGDH-230ENST00000641927 XKR9Q5GH70 373 aa19.48■□□□□ 0.71
PHGDH-230ENST00000641927 ANO5Q75V66 913 aa19.48■□□□□ 0.71
PHGDH-230ENST00000641927 ERCC4Q92889 916 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-230ENST00000641927 UNC93B1Q9H1C4 597 aa19.48■□□□□ 0.71
PHGDH-230ENST00000641927 BLZF1Q9H2G9 400 aa19.48■□□□□ 0.71
PHGDH-230ENST00000641927 NRBP2Q9NSY0 501 aa19.48■□□□□ 0.71
PHGDH-230ENST00000641927 TRPC6Q9Y210 931 aa19.48■□□□□ 0.71
PHGDH-230ENST00000641927 CTAGE5O15320 804 aa19.47■□□□□ 0.71
PHGDH-230ENST00000641927 XRCC6P12956 609 aaKnown RBP eCLIP19.47■□□□□ 0.715e-6■■□□□ 11.5
PHGDH-230ENST00000641927 CASP1P29466 404 aa19.47■□□□□ 0.71
PHGDH-230ENST00000641927 SLC26A2P50443 739 aa19.47■□□□□ 0.71
PHGDH-230ENST00000641927 SLC12A3P55017 1021 aa19.47■□□□□ 0.71
PHGDH-230ENST00000641927 GPBP1Q86WP2 473 aa19.47■□□□□ 0.71
PHGDH-230ENST00000641927 SYT2Q8N9I0 419 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-230ENST00000641927 FAM167AQ96KS9 214 aa19.47■□□□□ 0.71
PHGDH-230ENST00000641927 CEP170P1Q96L14 293 aa19.47■□□□□ 0.71
PHGDH-230ENST00000641927 MTRQ99707 1265 aa19.47■□□□□ 0.71
PHGDH-230ENST00000641927 C16orf70Q9BSU1 422 aa19.47■□□□□ 0.71
PHGDH-230ENST00000641927 LRRC27Q9C0I9 530 aa19.47■□□□□ 0.71
PHGDH-230ENST00000641927 UPF3AQ9H1J1 476 aaKnown RBP19.47■□□□□ 0.71
PHGDH-230ENST00000641927 ANKEF1Q9NU02 776 aa19.47■□□□□ 0.71
PHGDH-230ENST00000641927 DBR1Q9UK59 544 aaKnown RBP19.47■□□□□ 0.71
PHGDH-230ENST00000641927 WDR81Q562E7 1941 aa19.47■□□□□ 0.71
PHGDH-230ENST00000641927 H3BRB1 525 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 ZEB2O60315 1214 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 KRT18P05783 430 aaKnown RBP19.46■□□□□ 0.71
PHGDH-230ENST00000641927 PRR29P0C7W0 189 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 HOXD8P13378 290 aaPredicted RBP19.46■□□□□ 0.71
PHGDH-230ENST00000641927 NPEPPSP55786 919 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 MTFR1Q15390 333 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 MTERF2Q49AM1 385 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 RNF208Q9H0X6 261 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 TUT1Q9H6E5 874 aaKnown RBP19.46■□□□□ 0.71
PHGDH-230ENST00000641927 BMP2KQ9NSY1 1161 aaPredicted RBP19.46■□□□□ 0.71
PHGDH-230ENST00000641927 ADAMTS4O75173 837 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 STBD1O95210 358 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 CCL5P13501 91 aa19.46■□□□□ 0.71
PHGDH-230ENST00000641927 RARRES1P49788 294 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms