RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 ANKRD13CQ8N6S4 541 aa18.67■□□□□ 0.58
PHGDH-229ENST00000641891 DRC1Q96MC2 740 aa18.67■□□□□ 0.58
PHGDH-229ENST00000641891 TEPSINQ96N21 525 aa18.67■□□□□ 0.58
PHGDH-229ENST00000641891 ARFGAP3Q9NP61 516 aa18.67■□□□□ 0.58
PHGDH-229ENST00000641891 SALL4Q9UJQ4 1053 aa18.67■□□□□ 0.58
PHGDH-229ENST00000641891 ZMYM2Q9UBW7 1377 aa18.67■□□□□ 0.58
PHGDH-229ENST00000641891 PDXKO00764 312 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 USO1O60763 962 aaKnown RBP18.66■□□□□ 0.58
PHGDH-229ENST00000641891 FAM13AO94988 1023 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 ICAM1P05362 532 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 ITGB5P18084 799 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 HSD17B4P51659 736 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 ARID5AQ03989 594 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-229ENST00000641891 ZC2HC1CQ53FD0 456 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-229ENST00000641891 MYCT1Q8N699 235 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 BANK1Q8NDB2 785 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 TYW1Q9NV66 732 aaKnown RBP18.66■□□□□ 0.58
PHGDH-229ENST00000641891 ARMCX3Q9UH62 379 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-229ENST00000641891 IPO5O00410 1097 aaKnown RBP18.66■□□□□ 0.58
PHGDH-229ENST00000641891 SLC9A1P19634 815 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 MAGEA1P43355 309 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 RAPGEF1Q13905 1077 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 ENOX2Q16206 610 aaKnown RBP18.66■□□□□ 0.58
PHGDH-229ENST00000641891 DCAF17Q5H9S7 520 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-229ENST00000641891 FRMD5Q7Z6J6 570 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 CPXCR1Q8N123 301 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 CLEC4DQ8WXI8 215 aa18.66■□□□□ 0.58
PHGDH-229ENST00000641891 RNF216Q9NWF9 866 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-229ENST00000641891 CCDC151A5D8V7 595 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 TGFB1I1O43294 461 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 RASSF7Q02833 373 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 LONRF2Q1L5Z9 754 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 DPY19L2P1Q6NXN4 242 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 TEX2Q8IWB9 1127 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 MXRA8Q9BRK3 442 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 TEKT3Q9BXF9 490 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 TAOK3Q9H2K8 898 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 OLFML3Q9NRN5 406 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 HOMER2Q9NSB8 354 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 RAB21Q9UL25 225 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 SSU72P8A0A1W2PR75 194 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 SERPING1P05155 500 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 GAP43P17677 238 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 VSNL1P62760 191 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 SETQ01105 290 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-229ENST00000641891 BRD3Q15059 726 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 SLC9C1Q4G0N8 1177 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 B3GNT9Q6UX72 402 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 FAM133AQ8N9E0 248 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 JDP2Q8WYK2 163 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 LXNQ9BS40 222 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 WDR11Q9BZH6 1224 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 RAVER2Q9HCJ3 691 aaKnown RBP18.65■□□□□ 0.58
PHGDH-229ENST00000641891 JADE2Q9NQC1 790 aa18.65■□□□□ 0.58
PHGDH-229ENST00000641891 FRMPD4Q14CM0 1322 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 ANO9A1A5B4 782 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 PDE2AO00408 941 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-229ENST00000641891 AFPP02771 609 aaKnown RBP18.64■□□□□ 0.57
PHGDH-229ENST00000641891 COG2Q14746 738 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 MUM1L1Q5H9M0 696 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 SLC16A10Q8TF71 515 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 SYN2Q92777 582 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-229ENST00000641891 FUT8Q9BYC5 575 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 POTEB2H3BUK9 544 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 NFKBIEO00221 500 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 TACC1O75410 805 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 ALAS1P13196 640 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 EPHA7Q15375 998 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 DALRD3Q5D0E6 543 aaKnown RBP18.64■□□□□ 0.57
PHGDH-229ENST00000641891 TCERG1LQ5VWI1 586 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 ARHGAP27Q6ZUM4 889 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 PRPF38AQ8NAV1 312 aaKnown RBP18.64■□□□□ 0.57
PHGDH-229ENST00000641891 FIZ1Q96SL8 496 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 PARVGQ9HBI0 331 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 PCDHB13Q9Y5F0 798 aa18.64■□□□□ 0.57
PHGDH-229ENST00000641891 RPTORQ8N122 1335 aa18.63■□□□□ 0.57
PHGDH-229ENST00000641891 WDR46O15213 610 aaKnown RBP18.63■□□□□ 0.57
PHGDH-229ENST00000641891 XRCC5P13010 732 aaKnown RBP18.63■□□□□ 0.57
PHGDH-229ENST00000641891 SAMD7Q7Z3H4 446 aa18.63■□□□□ 0.57
PHGDH-229ENST00000641891 TRIM58Q8NG06 486 aa18.63■□□□□ 0.57
PHGDH-229ENST00000641891 NACC1Q96RE7 527 aa18.63■□□□□ 0.57
PHGDH-229ENST00000641891 NUCKS1Q9H1E3 243 aaKnown RBP18.63■□□□□ 0.57
PHGDH-229ENST00000641891 DEFB129Q9H1M3 183 aa18.63■□□□□ 0.57
PHGDH-229ENST00000641891 RBAK-RBAKDNI3L0D1 243 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 PJA2O43164 708 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 BUB1O43683 1085 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 EPB41P11171 864 aaKnown RBP18.62■□□□□ 0.57
PHGDH-229ENST00000641891 KCTD17Q8N5Z5 321 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 SUGCTQ9HAC7 445 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 ABCB6Q9NP58 842 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 KCNH7Q9NS40 1196 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 PPP1R1BQ9UD71 204 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-229ENST00000641891 AJAP1Q9UKB5 411 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-229ENST00000641891 EIF3DO15371 548 aaKnown RBP eCLIP18.62■□□□□ 0.57
PHGDH-229ENST00000641891 ATP8B1O43520 1251 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 PON1P27169 355 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 ZNF280AP59817 542 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-229ENST00000641891 DMTNQ08495 405 aa18.62■□□□□ 0.57
PHGDH-229ENST00000641891 ASIC2Q16515 512 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms