RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 POP1Q99575 1024 aaKnown RBP8.52□□□□□ -1.05
PHGDH-225ENST00000641720 KATNAL1Q9BW62 490 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 PXMP2Q9NR77 195 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 CD207Q9UJ71 328 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 FAM50BQ9Y247 325 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 FRMPD4Q14CM0 1322 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 BAHCC1Q9P281 2608 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 PRR23AA6NEV1 266 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 NCK2O43639 380 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 DHX16O60231 1041 aaKnown RBP8.51□□□□□ -1.05
PHGDH-225ENST00000641720 CAND2O75155 1236 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 CHRNA1P02708 482 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 CALM1P0DP23 149 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 CALM2P0DP24 149 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 CALM3P0DP25 149 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 UBA1P22314 1058 aaKnown RBP8.51□□□□□ -1.05
PHGDH-225ENST00000641720 AVPR2P30518 371 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 KIF5BP33176 963 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 CTNNB1P35222 781 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 NBL1P41271 181 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 METAP2P50579 478 aaKnown RBP eCLIP8.51□□□□□ -1.051e-10■■■□□ 15.8
PHGDH-225ENST00000641720 RBM10P98175 930 aaKnown RBP8.51□□□□□ -1.05
PHGDH-225ENST00000641720 FOXK2Q01167 660 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 SIGLEC14Q08ET2 396 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 STK3Q13188 491 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 CELF3Q5SZQ8 465 aaKnown RBP8.51□□□□□ -1.05
PHGDH-225ENST00000641720 SPPL3Q8TCT6 385 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 ATP8B4Q8TF62 1192 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 PIBF1Q8WXW3 757 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 PBXIP1Q96AQ6 731 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 MTMR8Q96EF0 704 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 YME1L1Q96TA2 773 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 PRRX2Q99811 253 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 PDCD2LQ9BRP1 358 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 SPZ1Q9BXG8 430 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 RNPEPQ9H4A4 650 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 PLAGL2Q9UPG8 496 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 PCDHGC5Q9Y5F6 944 aa8.51□□□□□ -1.05
PHGDH-225ENST00000641720 hCG_1642624A0A1W2PR95 340 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 PFKFB2O60825 505 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 PPFIA3O75145 1194 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 PPFIA4O75335 1185 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 EIF3JO75822 258 aaKnown RBP8.5□□□□□ -1.05
PHGDH-225ENST00000641720 DGKIO75912 1065 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 LGALS2P05162 132 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 ITGB1P05556 798 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 NR3C2P08235 984 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 SMIM10L2AP0DMW4 78 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 SMIM10L2BP0DMW5 78 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 ADD1P35611 737 aaKnown RBP8.5□□□□□ -1.05
PHGDH-225ENST00000641720 THPOP40225 353 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 CHMP4BP1P59074 171 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 CCT2P78371 535 aaKnown RBP8.5□□□□□ -1.05
PHGDH-225ENST00000641720 LAMC2Q13753 1193 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 STXBP2Q15833 593 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 PKN1Q16512 942 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 ME3Q16798 604 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 QRICH1Q2TAL8 776 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 USH1GQ495M9 461 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 SYNE3Q6ZMZ3 975 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 RTN4RL1Q86UN2 441 aaPredicted RBP8.5□□□□□ -1.05
PHGDH-225ENST00000641720 HOMER1Q86YM7 354 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 CCDC82Q8N4S0 544 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 EFHBQ8N7U6 833 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 NECAB1Q8N987 351 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 NSUN6Q8TEA1 469 aaKnown RBP8.5□□□□□ -1.05
PHGDH-225ENST00000641720 P2RX5Q93086 422 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 ZNF274Q96GC6 653 aaPredicted RBP8.5□□□□□ -1.05
PHGDH-225ENST00000641720 PIGSQ96S52 555 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 RMDN3Q96TC7 470 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 IFIH1Q9BYX4 1025 aaKnown RBP8.5□□□□□ -1.05
PHGDH-225ENST00000641720 RIOX1Q9H6W3 641 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 VAT1LQ9HCJ6 419 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 USP15Q9Y4E8 981 aaPredicted RBP8.5□□□□□ -1.05
PHGDH-225ENST00000641720 MRPL42Q9Y6G3 142 aaKnown RBP8.5□□□□□ -1.05
PHGDH-225ENST00000641720 MYH15Q9Y2K3 1946 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 ABCB11O95342 1321 aa8.5□□□□□ -1.05
PHGDH-225ENST00000641720 ZBTB5O15062 677 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 UPP2O95045 317 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 GGPS1O95749 300 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 CTSHP09668 335 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 EIF2AK2P19525 551 aaKnown RBP8.49□□□□□ -1.05
PHGDH-225ENST00000641720 ICAM3P32942 547 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 SCRN1Q12765 414 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 LPIN1Q14693 890 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 ANKRD1Q15327 319 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 NTRK3Q16288 839 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 VSIG10LQ86VR7 867 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 TRIM50Q86XT4 487 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 LMBR1Q8WVP7 490 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 SEPT8Q92599 483 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 PHKBQ93100 1093 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 GTF3C6Q969F1 213 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 LZTS2Q9BRK4 669 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 C11orf84Q9BUA3 381 aaPredicted RBP8.49□□□□□ -1.05
PHGDH-225ENST00000641720 PLVAPQ9BX97 442 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 S1PR5Q9H228 398 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 RBM28Q9NW13 759 aaKnown RBP8.49□□□□□ -1.05
PHGDH-225ENST00000641720 PNMA2Q9UL42 364 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 BARX2Q9UMQ3 279 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms