RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SERPING1P05155 500 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 SLC18A3Q16572 532 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 LONRF1Q17RB8 773 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 ANKRD20A2Q5SQ80 823 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 ANKRD20A1Q5TYW2 823 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 ANKRD20A3Q5VUR7 823 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 RNF25Q96BH1 459 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-227ENST00000640957 MMTAG2Q9BU76 263 aaKnown RBP14.95□□□□□ -0.02
SCARB2-227ENST00000640957 PPP1R12CQ9BZL4 782 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 MYH7BA7E2Y1 1941 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 CYTH3O43739 400 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 SMIM24O75264 130 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 ACSL3O95573 720 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 NQO1P15559 274 aaKnown RBP14.95□□□□□ -0.02
SCARB2-227ENST00000640957 PCK1P35558 622 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 IRX1P78414 480 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-227ENST00000640957 BIRC3Q13489 604 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 DIXDC1Q155Q3 683 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 MIS18BP1Q6P0N0 1132 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 PNMA1Q8ND90 353 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 KDM4CQ9H3R0 1056 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 DNAJC8O75937 253 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-227ENST00000640957 OR52Z1P0C646 297 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 PLCG2P16885 1265 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 YY1P25490 414 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 NCALDP61601 193 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 CDK17Q00537 523 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 EAPPQ56P03 285 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-227ENST00000640957 ARL6IP4Q66PJ3 421 aaKnown RBP14.95□□□□□ -0.02
SCARB2-227ENST00000640957 SH3RF3Q8TEJ3 882 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-227ENST00000640957 HOOK2Q96ED9 719 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 CALML4Q96GE6 196 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 SETDB2Q96T68 719 aa14.95□□□□□ -0.02
SCARB2-227ENST00000640957 CRNKL1Q9BZJ0 848 aaKnown RBP14.95□□□□□ -0.02
SCARB2-227ENST00000640957 ZNF219Q9P2Y4 722 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-227ENST00000640957 FLT1P17948 1338 aa14.94□□□□□ -0.02
SCARB2-227ENST00000640957 PJA2O43164 708 aa14.94□□□□□ -0.02
SCARB2-227ENST00000640957 KCNJ1P48048 391 aa14.94□□□□□ -0.02
SCARB2-227ENST00000640957 PSMD2Q13200 908 aa14.94□□□□□ -0.02
SCARB2-227ENST00000640957 CENPPQ6IPU0 288 aa14.94□□□□□ -0.02
SCARB2-227ENST00000640957 ALKBH5Q6P6C2 394 aaKnown RBP14.94□□□□□ -0.02
SCARB2-227ENST00000640957 INTS5Q6P9B9 1019 aaKnown RBP14.94□□□□□ -0.02
SCARB2-227ENST00000640957 RNF10Q8N5U6 811 aaKnown RBP14.94□□□□□ -0.02
SCARB2-227ENST00000640957 TBCKQ8TEA7 893 aa14.94□□□□□ -0.02
SCARB2-227ENST00000640957 ZNF317Q96PQ6 595 aaPredicted RBP14.94□□□□□ -0.02
SCARB2-227ENST00000640957 POP1Q99575 1024 aaKnown RBP14.94□□□□□ -0.02
SCARB2-227ENST00000640957 UTRNP46939 3433 aa14.94□□□□□ -0.02
SCARB2-227ENST00000640957 DPPA5A6NC42 116 aa14.94□□□□□ -0.02
SCARB2-227ENST00000640957 TDP2O95551 362 aa14.94□□□□□ -0.02
SCARB2-227ENST00000640957 FGFR2P21802 821 aa14.94□□□□□ -0.02
SCARB2-227ENST00000640957 HNRNPH3P31942 346 aaKnown RBP14.94□□□□□ -0.02
SCARB2-227ENST00000640957 CTCFP49711 727 aaPredicted RBP14.94□□□□□ -0.02
SCARB2-227ENST00000640957 MAPKAPK5Q8IW41 473 aa14.94□□□□□ -0.02
SCARB2-227ENST00000640957 ZNF444Q8N0Y2 327 aaPredicted RBP14.94□□□□□ -0.02
SCARB2-227ENST00000640957 DDX23Q9BUQ8 820 aaKnown RBP14.94□□□□□ -0.02
SCARB2-227ENST00000640957 ARFGEF2Q9Y6D5 1785 aa14.94□□□□□ -0.02
SCARB2-227ENST00000640957 LINGO3P0C6S8 592 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 RARAP10276 462 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 HIBADHP31937 336 aaKnown RBP14.93□□□□□ -0.02
SCARB2-227ENST00000640957 VPS41P49754 854 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 MECOMQ03112 1051 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 LACTB2Q53H82 288 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-227ENST00000640957 DENND2CQ68D51 928 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 ZNF449Q6P9G9 518 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 USP17L2Q6R6M4 530 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 C18orf8Q96DM3 657 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 PYM1Q9BRP8 204 aaKnown RBP14.93□□□□□ -0.02
SCARB2-227ENST00000640957 ZMYND12Q9H0C1 365 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 EBF2Q9HAK2 575 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 ZBTB12Q9Y330 459 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-227ENST00000640957 TSPY3P0CV98 308 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 TSPY8P0CW00 308 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 GNAT1P11488 350 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 LRRC55Q6ZSA7 311 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 TXNRD3Q86VQ6 643 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 SNX29Q8TEQ0 813 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 PWWP2AQ96N64 755 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 ADAM7Q9H2U9 754 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 AJAP1Q9UKB5 411 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-227ENST00000640957 SMCO2A6NFE2 343 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 ERVV-1B6SEH8 477 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 RBM5P52756 815 aaKnown RBP eCLIP14.93□□□□□ -0.02
SCARB2-227ENST00000640957 TRIP13Q15645 432 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-227ENST00000640957 ECM1Q16610 540 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 TBC1D9BQ66K14 1250 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 ZNF384Q8TF68 577 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 TGFBRAP1Q8WUH2 860 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 RMDN2Q96LZ7 410 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.93□□□□□ -0.02
SCARB2-227ENST00000640957 BLOC1S4Q9NUP1 217 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 TSKSQ9UJT2 592 aa14.93□□□□□ -0.02
SCARB2-227ENST00000640957 SMNDC1O75940 238 aaKnown RBP eCLIP14.92□□□□□ -0.02
SCARB2-227ENST00000640957 GFPT2O94808 682 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 LCA5LO95447 670 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 POLE2P56282 527 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 CUL1Q13616 776 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 LRIG3Q6UXM1 1119 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 SCFD2Q8WU76 684 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 L3MBTL3Q96JM7 780 aaPredicted RBP14.92□□□□□ -0.02
SCARB2-227ENST00000640957 ETNK1Q9HBU6 452 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms