RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 CACNA1IQ9P0X4 2223 aa9.48□□□□□ -0.89
SCARB2-226ENST00000640916 RAB11FIP3O75154 756 aa9.48□□□□□ -0.89
SCARB2-226ENST00000640916 TOP1P11387 765 aaKnown RBP9.48□□□□□ -0.89
SCARB2-226ENST00000640916 ATXN1P54253 815 aaKnown RBP9.48□□□□□ -0.89
SCARB2-226ENST00000640916 UBE3AQ05086 875 aa9.48□□□□□ -0.89
SCARB2-226ENST00000640916 TRIM50Q86XT4 487 aa9.48□□□□□ -0.89
SCARB2-226ENST00000640916 NPAS4Q8IUM7 802 aa9.48□□□□□ -0.89
SCARB2-226ENST00000640916 ZDHHC14Q8IZN3 488 aa9.48□□□□□ -0.89
SCARB2-226ENST00000640916 IL31RAQ8NI17 732 aa9.48□□□□□ -0.89
SCARB2-226ENST00000640916 MICAL1Q8TDZ2 1067 aa9.48□□□□□ -0.89
SCARB2-226ENST00000640916 UBA5Q9GZZ9 404 aa9.48□□□□□ -0.89
SCARB2-226ENST00000640916 MFSD1Q9H3U5 465 aa9.48□□□□□ -0.89
SCARB2-226ENST00000640916 GPR179Q6PRD1 2367 aa9.48□□□□□ -0.89
SCARB2-226ENST00000640916 CHD8Q9HCK8 2581 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 HIDE1A8MVS5 230 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 ORC4O43929 436 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 RANBP6O60518 1105 aaKnown RBP9.47□□□□□ -0.89
SCARB2-226ENST00000640916 FGF18O76093 207 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 SLC3A2P08195 630 aaKnown RBP9.47□□□□□ -0.89
SCARB2-226ENST00000640916 GOLGA8HP0CJ92 632 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 HOXB8P17481 243 aaPredicted RBP9.47□□□□□ -0.89
SCARB2-226ENST00000640916 HSD17B4P51659 736 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 EMP3P54852 163 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 GHRHRQ02643 423 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 APOBRQ0VD83 1088 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 ARHGEF16Q5VV41 709 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 LLGL2Q6P1M3 1020 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 VSIG10LQ86VR7 867 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 SUMF1Q8NBK3 374 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 RUBCNQ92622 972 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 EPAS1Q99814 870 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 PDCD2LQ9BRP1 358 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 NAPBQ9H115 298 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 ADAM7Q9H2U9 754 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 ERVK-5Q9HDB9 667 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 TCP11L1Q9NUJ3 509 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 ANAPC4Q9UJX5 808 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 ATRXP46100 2492 aa9.47□□□□□ -0.89
SCARB2-226ENST00000640916 C2orf16Q68DN1 1984 aa9.46□□□□□ -0.89
SCARB2-226ENST00000640916 FSD2A1L4K1 749 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 SMARCA5O60264 1052 aaPredicted RBP9.46□□□□□ -0.9
SCARB2-226ENST00000640916 WEE2P0C1S8 567 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 TGFB3P10600 412 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 GNAT1P11488 350 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 CD52P31358 61 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 ARHGAP4P98171 946 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 CDC37Q16543 378 aaPredicted RBP9.46□□□□□ -0.9
SCARB2-226ENST00000640916 PDE12Q6L8Q7 609 aaKnown RBP9.46□□□□□ -0.9
SCARB2-226ENST00000640916 KANK3Q6NY19 840 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 KCNV1Q6PIU1 500 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 TSHZ1Q6ZSZ6 1077 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 DDX12PQ92771 950 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 HS3ST6Q96QI5 342 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 RTP3Q9BQQ7 232 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 NACAP1Q9BZK3 213 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 TMX1Q9H3N1 280 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 AAASQ9NRG9 546 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 ABCB11O95342 1321 aa9.46□□□□□ -0.9
SCARB2-226ENST00000640916 MBLAC1A4D2B0 266 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-226ENST00000640916 ZFYP08048 801 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-226ENST00000640916 HSPD1P10809 573 aaKnown RBP9.45□□□□□ -0.9
SCARB2-226ENST00000640916 MYCLP12524 364 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-226ENST00000640916 SEMA3FQ13275 785 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 PGM5Q15124 567 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 MARCH8Q5T0T0 291 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 PLPP4Q5VZY2 271 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 TSHZ3Q63HK5 1081 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 STOX1Q6ZVD7 989 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 MCF2L2Q86YR7 1114 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 FTSJ3Q8IY81 847 aaKnown RBP9.45□□□□□ -0.9
SCARB2-226ENST00000640916 COLGALT1Q8NBJ5 622 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 DNAJB3Q8WWF6 145 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 RIN2Q8WYP3 895 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-226ENST00000640916 ZBTB10Q96DT7 871 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 NECTIN4Q96NY8 510 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 GPR20Q99678 358 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 USP26Q9BXU7 913 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 CWH43Q9H720 699 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 MLXIPQ9HAP2 919 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 ECHDC1Q9NTX5 307 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 TMEM260Q9NX78 707 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 CDY2AQ9Y6F7 541 aa9.45□□□□□ -0.9
SCARB2-226ENST00000640916 ASPMQ8IZT6 3477 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 KRBA1A5PL33 1030 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 GPR37O15354 613 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 MGEA5O60502 916 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 ADRB1P08588 477 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 SP9P0CG40 484 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 SCG2P13521 617 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 ITIH3Q06033 890 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 QRICH1Q2TAL8 776 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 ZMYM1Q5SVZ6 1142 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 FAM102BQ5T8I3 360 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 VPS53Q5VIR6 699 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 ADGRF4Q8IZF3 695 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 SIX5Q8N196 739 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 C12orf76Q8N812 135 aaPredicted RBP9.44□□□□□ -0.9
SCARB2-226ENST00000640916 TDRD5Q8NAT2 981 aaKnown RBP9.44□□□□□ -0.9
SCARB2-226ENST00000640916 PANK1Q8TE04 598 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms