RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 TRAPPC10P48553 1259 aa13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 PSEN2P49810 448 aa13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 ZNF200P98182 395 aaPredicted RBP13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 FAM160A1Q05DH4 1040 aa13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 MFSD10Q14728 455 aa13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 ARHGEF16Q5VV41 709 aa13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 CNKSR3Q6P9H4 555 aa13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 CCDC155Q8N6L0 562 aa13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 IL31RAQ8NI17 732 aa13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 GOLPH3LQ9H4A5 285 aa13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 C6orf50Q9HD87 102 aa13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 COL4A4P53420 1690 aaPredicted RBP13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 BRWD1Q9NSI6 2320 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 ESYT2A0FGR8 921 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 KINO60870 393 aaKnown RBP13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 GJB5O95377 273 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 CFBP00751 764 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 ATP2B1P20020 1258 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 GNA11P29992 359 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 KCNJ6P48051 423 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 SP2Q02086 613 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 PTK7Q13308 1070 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 LAMC2Q13753 1193 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 KIAA0753Q2KHM9 967 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 TTC38Q5R3I4 469 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 AXDND1Q5T1B0 1012 aaPredicted RBP13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 ZNF618Q5T7W0 954 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 PIK3AP1Q6ZUJ8 805 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 C7orf31Q8N865 590 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 KRI1Q8N9T8 703 aaKnown RBP13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 ENGASEQ8NFI3 743 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 GDPD5Q8WTR4 605 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 PDCD2LQ9BRP1 358 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 AMNQ9BXJ7 453 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 COG5Q9UP83 839 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 PCDHB6Q9Y5E3 794 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 MRVI1Q9Y6F6 885 aa13.42□□□□□ -0.26
ERGIC3-220ENST00000640748 PNMA6FA0A0J9YX94 578 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 CCDC194A0A1B0GVG4 234 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 ABHD14A-ACY1A0A1B0GW23 586 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 FAM205CA6NFA0 338 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 SMCO2A6NFE2 343 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 M0R2N6 131 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 PARNO95453 639 aaKnown RBP13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 HOXA13P31271 388 aaPredicted RBP13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 HSDL1Q3SXM5 330 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 EARS2Q5JPH6 523 aaKnown RBP13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 CELF3Q5SZQ8 465 aaKnown RBP13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 TYW1BQ6NUM6 668 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 PPP1R18Q6NYC8 613 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 VSIG10LQ86VR7 867 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 FMR1NBQ8N0W7 255 aaPredicted RBP13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 C16orf70Q9BSU1 422 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 KATNAL1Q9BW62 490 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 ZMYND12Q9H0C1 365 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 SUGCTQ9HAC7 445 aa13.41□□□□□ -0.26
ERGIC3-220ENST00000640748 A0A1B0GVL5 298 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 LINC01553A4QN01 128 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 ZBTB5O15062 677 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 SORBS3O60504 671 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 PPFIA4O75335 1185 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 CCDC192P0DO97 292 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 XRCC6P12956 609 aaKnown RBP eCLIP13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 HOXC8P31273 242 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 ERVK-21P61565 698 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 SNW1Q13573 536 aaKnown RBP13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 PGM5Q15124 567 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 CAMK4Q16566 473 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 RBM43Q6ZSC3 357 aaKnown RBP13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 KRT25Q7Z3Z0 450 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 SERINC5Q86VE9 423 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 DHX37Q8IY37 1157 aaKnown RBP13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 KHSRPQ92945 711 aaKnown RBP eCLIP13.4□□□□□ -0.269e-8■■□□□ 14.3
ERGIC3-220ENST00000640748 HLA-CQ95604 372 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 ZFP91Q96JP5 570 aaPredicted RBP13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 RAD9AQ99638 391 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 RBSNQ9H1K0 784 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 EPHX3Q9H6B9 360 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 BCAS3Q9H6U6 928 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 PCDHA6Q9UN73 950 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 PCDHA8Q9Y5H6 950 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 PCDHA1Q9Y5I3 950 aa13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 SRPRBQ9Y5M8 271 aaKnown RBP13.4□□□□□ -0.26
ERGIC3-220ENST00000640748 FAM237AA0A1B0GTK4 181 aa13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 GGPS1O95749 300 aa13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 MYCLP12524 364 aaPredicted RBP13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 PFKFB1P16118 471 aa13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 UBA1P22314 1058 aaKnown RBP13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 NDUFA8P51970 172 aa13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 ZNF174Q15697 407 aa13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 RESP18Q5W5W9 173 aa13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.39□□□□□ -0.274e-8■■■■■ 64.6
ERGIC3-220ENST00000640748 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 SPATA33Q96N06 139 aa13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 ZBED2Q9BTP6 218 aa13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 FUCA2Q9BTY2 467 aa13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 OSBPL7Q9BZF2 842 aa13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 FAM13BQ9NYF5 915 aa13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 MAP3K20Q9NYL2 800 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms