RNA–Protein interactions for RNA: ENST00000640545.1

GFAP-236, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-236ENST00000640545 KRT40Q6A162 431 aa16.68■□□□□ 0.26
GFAP-236ENST00000640545 ABHD15Q6UXT9 468 aa16.68■□□□□ 0.26
GFAP-236ENST00000640545 FAM43BQ6ZT52 329 aaPredicted RBP16.68■□□□□ 0.26
GFAP-236ENST00000640545 SMAP1Q8IYB5 467 aaPredicted RBP16.68■□□□□ 0.26
GFAP-236ENST00000640545 SP7Q8TDD2 431 aaPredicted RBP16.68■□□□□ 0.26
GFAP-236ENST00000640545 ADAMTS19Q8TE59 1207 aa16.68■□□□□ 0.26
GFAP-236ENST00000640545 UHRF1Q96T88 793 aaPredicted RBP16.68■□□□□ 0.26
GFAP-236ENST00000640545 SAMM50Q9Y512 469 aa16.68■□□□□ 0.26
GFAP-236ENST00000640545 TRPV2Q9Y5S1 764 aa16.68■□□□□ 0.26
GFAP-236ENST00000640545 IGKV6D-21A0A0A0MT36 114 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 SMIM35A0A1B0GVV1 85 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 PSAPP07602 524 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 KRT76Q01546 638 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 NTRK3Q16288 839 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 PRR16Q569H4 304 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 ZNF484Q5JVG2 852 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 ODR4Q5SWX8 454 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 ZNF746Q6NUN9 644 aaPredicted RBP16.67■□□□□ 0.26
GFAP-236ENST00000640545 SWSAP1Q6NVH7 229 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 SPRED2Q7Z698 418 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 FIBCD1Q8N539 461 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 ATP8B4Q8TF62 1192 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 ZNF274Q96GC6 653 aaPredicted RBP16.67■□□□□ 0.26
GFAP-236ENST00000640545 C17orf80Q9BSJ5 609 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 TM6SF1Q9BZW5 370 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 RWDD3Q9Y3V2 267 aa16.67■□□□□ 0.26
GFAP-236ENST00000640545 IGLV3-22A0A075B6J6 115 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 ENPP3O14638 875 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 CCNE2O96020 404 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 KLRC1P26715 233 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 USP11P51784 963 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 TFF2Q03403 129 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 EPC2Q52LR7 807 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 MTHFD1LQ6UB35 978 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 CRYGNQ8WXF5 182 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 CELF4Q9BZC1 486 aaKnown RBP16.66■□□□□ 0.26
GFAP-236ENST00000640545 OSBPL7Q9BZF2 842 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 NCOA5Q9HCD5 579 aaKnown RBP16.66■□□□□ 0.26
GFAP-236ENST00000640545 RNF216Q9NWF9 866 aaPredicted RBP16.66■□□□□ 0.26
GFAP-236ENST00000640545 VPS54Q9P1Q0 977 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 CEP131Q9UPN4 1083 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 PCDHA10Q9Y5I2 948 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 PRRC2BQ5JSZ5 2229 aaKnown RBP16.66■□□□□ 0.26
GFAP-236ENST00000640545 TRANK1O15050 2925 aa16.66■□□□□ 0.26
GFAP-236ENST00000640545 COL1A2P08123 1366 aa16.65■□□□□ 0.26
GFAP-236ENST00000640545 DHX15O43143 795 aaKnown RBP16.65■□□□□ 0.26
GFAP-236ENST00000640545 EIF5BO60841 1220 aaKnown RBP16.65■□□□□ 0.26
GFAP-236ENST00000640545 PPFIA3O75145 1194 aa16.65■□□□□ 0.26
GFAP-236ENST00000640545 DEXIO95424 95 aa16.65■□□□□ 0.26
GFAP-236ENST00000640545 CD52P31358 61 aa16.65■□□□□ 0.26
GFAP-236ENST00000640545 CIITAP33076 1130 aa16.65■□□□□ 0.26
GFAP-236ENST00000640545 TMEM62Q0P6H9 643 aa16.65■□□□□ 0.26
GFAP-236ENST00000640545 PAK2Q13177 524 aa16.65■□□□□ 0.26
GFAP-236ENST00000640545 TMEM192Q8IY95 271 aa16.65■□□□□ 0.26
GFAP-236ENST00000640545 FAM177A1Q8N128 213 aaPredicted RBP16.65■□□□□ 0.26
GFAP-236ENST00000640545 TRAPPC12Q8WVT3 735 aa16.65■□□□□ 0.26
GFAP-236ENST00000640545 BBXQ8WY36 941 aaPredicted RBP16.65■□□□□ 0.26
GFAP-236ENST00000640545 PDRG1Q9NUG6 133 aa16.65■□□□□ 0.26
GFAP-236ENST00000640545 WDR64B1ANS9 1081 aa16.64■□□□□ 0.25
GFAP-236ENST00000640545 CDKL5O76039 1030 aa16.64■□□□□ 0.25
GFAP-236ENST00000640545 STAG3L1P0CL83 205 aa16.64■□□□□ 0.25
GFAP-236ENST00000640545 BMP1P13497 986 aa16.64■□□□□ 0.25
GFAP-236ENST00000640545 GPM6BQ13491 265 aa16.64■□□□□ 0.25
GFAP-236ENST00000640545 TOB2Q14106 344 aaPredicted RBP16.64■□□□□ 0.25
GFAP-236ENST00000640545 BTG3Q14201 252 aaPredicted RBP16.64■□□□□ 0.25
GFAP-236ENST00000640545 GALNT17Q6IS24 598 aa16.64■□□□□ 0.25
GFAP-236ENST00000640545 CCDC60Q8IWA6 550 aaPredicted RBP16.64■□□□□ 0.25
GFAP-236ENST00000640545 RASGRP4Q8TDF6 673 aa16.64■□□□□ 0.25
GFAP-236ENST00000640545 ZBTB10Q96DT7 871 aa16.64■□□□□ 0.25
GFAP-236ENST00000640545 MRPL38Q96DV4 380 aaKnown RBP16.64■□□□□ 0.25
GFAP-236ENST00000640545 FAM167AQ96KS9 214 aa16.64■□□□□ 0.25
GFAP-236ENST00000640545 UIMC1Q96RL1 719 aa16.64■□□□□ 0.25
GFAP-236ENST00000640545 UPF3BQ9BZI7 483 aaKnown RBP16.64■□□□□ 0.25
GFAP-236ENST00000640545 PADI3Q9ULW8 664 aa16.64■□□□□ 0.25
GFAP-236ENST00000640545 GINS2Q9Y248 185 aa16.64■□□□□ 0.25
GFAP-236ENST00000640545 IGSF9BQ9UPX0 1349 aa16.64■□□□□ 0.25
GFAP-236ENST00000640545 H3BNC9 293 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 RB1P06400 928 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 XBP1P17861 261 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 TMOD1P28289 359 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 NFX1Q12986 1120 aaKnown RBP16.63■□□□□ 0.25
GFAP-236ENST00000640545 STK3Q13188 491 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 TIGD5Q53EQ6 642 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 ERICH6BQ5W0A0 696 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 TRMT1LQ7Z2T5 733 aaKnown RBP16.63■□□□□ 0.25
GFAP-236ENST00000640545 METTL13Q8N6R0 699 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 C11orf84Q9BUA3 381 aaPredicted RBP16.63■□□□□ 0.25
GFAP-236ENST00000640545 AGO3Q9H9G7 860 aaKnown RBP16.63■□□□□ 0.25
GFAP-236ENST00000640545 NRBP2Q9NSY0 501 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 PPP4R2Q9NY27 417 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 LRFN2Q9ULH4 789 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 PCDHA4Q9UN74 947 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 MAFBQ9Y5Q3 323 aaPredicted RBP16.63■□□□□ 0.25
GFAP-236ENST00000640545 MICAL3Q7RTP6 2002 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 KDM3AQ9Y4C1 1321 aa16.63■□□□□ 0.25
GFAP-236ENST00000640545 TTC28Q96AY4 2481 aa16.62■□□□□ 0.25
GFAP-236ENST00000640545 GPR182O15218 404 aa16.62■□□□□ 0.25
GFAP-236ENST00000640545 MAGEB2O15479 319 aa16.62■□□□□ 0.25
GFAP-236ENST00000640545 GAS7O60861 476 aa16.62■□□□□ 0.25
GFAP-236ENST00000640545 RPS6KA5O75582 802 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms