RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 SAMSN1Q9NSI8 373 aaKnown RBP9.86□□□□□ -0.83
PAX6-259ENST00000639916 USP40Q9NVE5 1235 aa9.86□□□□□ -0.83
PAX6-259ENST00000639916 MYH1P12882 1939 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 SNED1Q8TER0 1413 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 H0YIN7 160 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 ABLIM1O14639 778 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 VIMP08670 466 aaKnown RBP9.85□□□□□ -0.83
PAX6-259ENST00000639916 FXR1P51114 621 aaKnown RBP eCLIP9.85□□□□□ -0.83
PAX6-259ENST00000639916 CCNG1P51959 295 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 SLC7A5Q01650 507 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 CCDC15Q0P6D6 951 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 POSTNQ15063 836 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 ENOX2Q16206 610 aaKnown RBP9.85□□□□□ -0.83
PAX6-259ENST00000639916 Q4G0T1 1027 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 CFAP58Q5T655 872 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 TRIM68Q6AZZ1 485 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 GALNT17Q6IS24 598 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 TYW1BQ6NUM6 668 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 HEATR3Q7Z4Q2 680 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 TMTC1Q8IUR5 882 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 RUBCNQ92622 972 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 CCDC43Q96MW1 224 aaKnown RBP9.85□□□□□ -0.83
PAX6-259ENST00000639916 CPVLQ9H3G5 476 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 DDX4Q9NQI0 724 aaKnown RBP9.85□□□□□ -0.83
PAX6-259ENST00000639916 PCDHA4Q9UN74 947 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 HMGB1P1B2RPK0 211 aaPredicted RBP9.85□□□□□ -0.83
PAX6-259ENST00000639916 GYPCP04921 128 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 PARP1P09874 1014 aaKnown RBP9.85□□□□□ -0.83
PAX6-259ENST00000639916 RPL13P26373 211 aaKnown RBP9.85□□□□□ -0.83
PAX6-259ENST00000639916 MCM7P33993 719 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 PBX1P40424 430 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 TRAPPC10P48553 1259 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 MRPS35P82673 323 aaKnown RBP9.85□□□□□ -0.83
PAX6-259ENST00000639916 GKAP1Q5VSY0 366 aaPredicted RBP9.85□□□□□ -0.83
PAX6-259ENST00000639916 USP17L2Q6R6M4 530 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 GRAMD1CQ8IYS0 662 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 MMGT1Q8N4V1 131 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 C17orf50Q8WW18 174 aa9.85□□□□□ -0.83
PAX6-259ENST00000639916 REXO2Q9Y3B8 237 aaKnown RBP9.85□□□□□ -0.83
PAX6-259ENST00000639916 DDX60LQ5H9U9 1706 aaKnown RBP9.84□□□□□ -0.83
PAX6-259ENST00000639916 CFAP73A6NFT4 308 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 CCT8L1PA6NM43 557 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 ACTN4O43707 911 aaKnown RBP9.84□□□□□ -0.83
PAX6-259ENST00000639916 GSTA1P08263 222 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 ATP2C1P98194 919 aaPredicted RBP9.84□□□□□ -0.83
PAX6-259ENST00000639916 LBRQ14739 615 aaKnown RBP9.84□□□□□ -0.83
PAX6-259ENST00000639916 SGSM1Q2NKQ1 1148 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 IQCEQ6IPM2 695 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 KANK3Q6NY19 840 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 HHIPL2Q6UWX4 724 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 APTXQ7Z2E3 356 aaKnown RBP9.84□□□□□ -0.83
PAX6-259ENST00000639916 PODNQ7Z5L7 613 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 CNGA4Q8IV77 575 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 FAM114A1Q8IWE2 563 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 CD302Q8IX05 232 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 RASGRP4Q8TDF6 673 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 PRCCQ92733 491 aaPredicted RBP9.84□□□□□ -0.83
PAX6-259ENST00000639916 SYMPKQ92797 1274 aaKnown RBP9.84□□□□□ -0.83
PAX6-259ENST00000639916 TEKT1Q969V4 418 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 MED15Q96RN5 788 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 SLC12A6Q9UHW9 1150 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 ATP2A2P16615 1042 aaKnown RBP9.84□□□□□ -0.83
PAX6-259ENST00000639916 STAT6P42226 847 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 GABPAQ06546 454 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 RNF220Q5VTB9 566 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 APOBEC3HQ6NTF7 200 aaKnown RBP9.84□□□□□ -0.83
PAX6-259ENST00000639916 CDC42EP5Q6NZY7 148 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 MLKLQ8NB16 471 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 C1orf131Q8NDD1 294 aaKnown RBP9.84□□□□□ -0.83
PAX6-259ENST00000639916 ENOX1Q8TC92 643 aaKnown RBP9.84□□□□□ -0.83
PAX6-259ENST00000639916 OPTNQ96CV9 577 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 CCDC51Q96ER9 411 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 BARHL2Q9NY43 387 aa9.84□□□□□ -0.83
PAX6-259ENST00000639916 COL11A2P13942 1736 aaPredicted RBP9.83□□□□□ -0.84
PAX6-259ENST00000639916 MYH8P13535 1937 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 A0A087X0B3 334 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 CHRNA5P30532 468 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 GJA8P48165 433 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 PABPC4Q13310 644 aaKnown RBP eCLIP9.83□□□□□ -0.84
PAX6-259ENST00000639916 STYK1Q6J9G0 422 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 DEFB132Q7Z7B7 95 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 SPZ1Q9BXG8 430 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 VAT1LQ9HCJ6 419 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 ATXN10Q9UBB4 475 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 SERPINB13Q9UIV8 391 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 CCDC194A0A1B0GVG4 234 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 USP17L5A8MUK1 530 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 PHF20L1A8MW92 1017 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 AKR1B1P15121 316 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 DESP17661 470 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 CYP11B2P19099 503 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 TMOD1P28289 359 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 PSMC4P43686 418 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 SARSP49591 514 aaKnown RBP9.83□□□□□ -0.84
PAX6-259ENST00000639916 ALDH5A1P51649 535 aaPredicted RBP9.83□□□□□ -0.84
PAX6-259ENST00000639916 EIF6P56537 245 aaKnown RBP9.83□□□□□ -0.84
PAX6-259ENST00000639916 KCNJ2P63252 427 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 NT5DC1Q5TFE4 455 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 CYP26C1Q6V0L0 522 aa9.83□□□□□ -0.84
PAX6-259ENST00000639916 LCA5Q86VQ0 697 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms