RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 Q6ZSN1 163 aa5.63□□□□□ -1.51
CCDC7-211ENST00000638889 PCDH19Q8TAB3 1148 aa5.63□□□□□ -1.51
CCDC7-211ENST00000638889 WNK4Q96J92 1243 aa5.63□□□□□ -1.51
CCDC7-211ENST00000638889 CATSPERZQ9NTU4 200 aa5.63□□□□□ -1.51
CCDC7-211ENST00000638889 MSRB2Q9Y3D2 182 aa5.63□□□□□ -1.51
CCDC7-211ENST00000638889 ARVCFO00192 962 aa5.62□□□□□ -1.51
CCDC7-211ENST00000638889 ARHGAP6O43182 974 aa5.62□□□□□ -1.51
CCDC7-211ENST00000638889 CDC14BO60729 498 aa5.62□□□□□ -1.51
CCDC7-211ENST00000638889 AMY2AP04746 511 aa5.62□□□□□ -1.51
CCDC7-211ENST00000638889 AMY2BP19961 511 aa5.62□□□□□ -1.51
CCDC7-211ENST00000638889 RRADP55042 308 aa5.62□□□□□ -1.51
CCDC7-211ENST00000638889 SUMO1P63165 101 aaKnown RBP5.62□□□□□ -1.51
CCDC7-211ENST00000638889 IL13RA1P78552 427 aa5.62□□□□□ -1.51
CCDC7-211ENST00000638889 ABHD18Q0P651 414 aa5.62□□□□□ -1.51
CCDC7-211ENST00000638889 DUSP8Q13202 625 aa5.62□□□□□ -1.51
CCDC7-211ENST00000638889 EIF4HQ15056 248 aaKnown RBP5.62□□□□□ -1.51
CCDC7-211ENST00000638889 IPO9Q96P70 1041 aaKnown RBP5.62□□□□□ -1.51
CCDC7-211ENST00000638889 CDC6Q99741 560 aa5.62□□□□□ -1.51
CCDC7-211ENST00000638889 BTBD2Q9BX70 525 aa5.62□□□□□ -1.51
CCDC7-211ENST00000638889 ING1Q9UK53 422 aaPredicted RBP5.62□□□□□ -1.51
CCDC7-211ENST00000638889 TRBV23-1A0A0A0MS06 115 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 ADCY3O60266 1144 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 CLASP2O75122 1294 aaKnown RBP5.61□□□□□ -1.51
CCDC7-211ENST00000638889 HMGCRP04035 888 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 PDE6AP16499 860 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 ST5P78524 1137 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 PTH1RQ03431 593 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 RASGRF1Q13972 1273 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 FHL2Q14192 279 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 CRY1Q16526 586 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 CRB2Q5IJ48 1285 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 OSTM1Q86WC4 334 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 PTRH1Q86Y79 214 aaKnown RBP5.61□□□□□ -1.51
CCDC7-211ENST00000638889 AMER2Q8N7J2 671 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 EXTL1Q92935 676 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 DPYSL5Q9BPU6 564 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 PLA2G12BQ9BX93 195 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 PUF60Q9UHX1 559 aaKnown RBP5.61□□□□□ -1.51
CCDC7-211ENST00000638889 PCDHA8Q9Y5H6 950 aa5.61□□□□□ -1.51
CCDC7-211ENST00000638889 ZNF561-AS1K7EIQ3 104 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 MATN2O00339 956 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 U2SURPO15042 1029 aaKnown RBP5.6□□□□□ -1.51
CCDC7-211ENST00000638889 PLSCR1O15162 318 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 PDPK1O15530 556 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 ZNF202O95125 648 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 C4BPAP04003 597 aaKnown RBP5.6□□□□□ -1.51
CCDC7-211ENST00000638889 C6orf222P0C671 652 aaPredicted RBP5.6□□□□□ -1.51
CCDC7-211ENST00000638889 PYGMP11217 842 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 MCM7P33993 719 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 GABREP78334 506 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 LACTBP83111 547 aaPredicted RBP5.6□□□□□ -1.51
CCDC7-211ENST00000638889 GUCY1A3Q02108 690 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 FAM47CQ5HY64 1035 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 USP30Q70CQ3 517 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 SPATC1Q76KD6 591 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 CKAP2LQ8IYA6 745 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 ZBTB38Q8NAP3 1195 aaPredicted RBP5.6□□□□□ -1.51
CCDC7-211ENST00000638889 OR14A2Q96R54 314 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 CCDC113Q9H0I3 377 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 C12orf65Q9H3J6 166 aaKnown RBP5.6□□□□□ -1.51
CCDC7-211ENST00000638889 NELFAQ9H3P2 528 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 AURKAIP1Q9NWT8 199 aaPredicted RBP5.6□□□□□ -1.51
CCDC7-211ENST00000638889 BTBD7Q9P203 1132 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 CBLCQ9ULV8 474 aa5.6□□□□□ -1.51
CCDC7-211ENST00000638889 PMS2P1A4D2B8 440 aa5.59□□□□□ -1.51
CCDC7-211ENST00000638889 NARSO43776 548 aaKnown RBP5.59□□□□□ -1.51
CCDC7-211ENST00000638889 ACRV1P26436 265 aa5.59□□□□□ -1.51
CCDC7-211ENST00000638889 KCNQ1P51787 676 aa5.59□□□□□ -1.51
CCDC7-211ENST00000638889 JAM2P57087 298 aa5.59□□□□□ -1.51
CCDC7-211ENST00000638889 NOLC1Q14978 699 aaKnown RBP eCLIP5.59□□□□□ -1.51
CCDC7-211ENST00000638889 TBR1Q16650 682 aa5.59□□□□□ -1.51
CCDC7-211ENST00000638889 LSM12Q3MHD2 195 aaKnown RBP5.59□□□□□ -1.51
CCDC7-211ENST00000638889 MTERF2Q49AM1 385 aa5.59□□□□□ -1.51
CCDC7-211ENST00000638889 TRIM68Q6AZZ1 485 aa5.59□□□□□ -1.51
CCDC7-211ENST00000638889 LARP4Q71RC2 724 aaKnown RBP eCLIP5.59□□□□□ -1.51
CCDC7-211ENST00000638889 WDR48Q8TAF3 677 aa5.59□□□□□ -1.51
CCDC7-211ENST00000638889 CFHR4Q92496 578 aa5.59□□□□□ -1.51
CCDC7-211ENST00000638889 CSRNP2Q9H175 543 aa5.59□□□□□ -1.51
CCDC7-211ENST00000638889 WDR33Q9C0J8 1336 aaKnown RBP5.58□□□□□ -1.52
CCDC7-211ENST00000638889 A0A0G2JNJ9 132 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 PRAMEF25A6NGN4 478 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 STK10O94804 968 aaKnown RBP5.58□□□□□ -1.52
CCDC7-211ENST00000638889 KRT15P19012 456 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 ECE1P42892 770 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 SSRP1Q08945 709 aaKnown RBP5.58□□□□□ -1.52
CCDC7-211ENST00000638889 LONRF2Q1L5Z9 754 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 FAM209AQ5JX71 171 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 NBPF6Q5VWK0 638 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 KANK2Q63ZY3 851 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 TMEM200BQ69YZ2 307 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 OTOP2Q7RTS6 562 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 C1orf210Q8IVY1 113 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 NBPF4Q96M43 638 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 OR10A2Q9H208 303 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 SMURF1Q9HCE7 757 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 Q9UFV3 132 aa5.58□□□□□ -1.52
CCDC7-211ENST00000638889 CCDC66A2RUB6 948 aa5.57□□□□□ -1.52
CCDC7-211ENST00000638889 MPIG6BO95866 241 aa5.57□□□□□ -1.52
CCDC7-211ENST00000638889 SRGAP2CP0DJJ0 459 aa5.57□□□□□ -1.52
CCDC7-211ENST00000638889 MC4RP32245 332 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms