RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-238ENST00000638755 ATRXP46100 2492 aa13.6□□□□□ -0.23
PAX6-238ENST00000638755 TMEM62Q0P6H9 643 aa13.6□□□□□ -0.23
PAX6-238ENST00000638755 PAK2Q13177 524 aa13.6□□□□□ -0.23
PAX6-238ENST00000638755 NEDD9Q14511 834 aa13.6□□□□□ -0.23
PAX6-238ENST00000638755 FCHSD1Q86WN1 690 aa13.6□□□□□ -0.23
PAX6-238ENST00000638755 ZDHHC14Q8IZN3 488 aa13.6□□□□□ -0.23
PAX6-238ENST00000638755 ZBTB10Q96DT7 871 aa13.6□□□□□ -0.23
PAX6-238ENST00000638755 JMJD4Q9H9V9 463 aa13.6□□□□□ -0.23
PAX6-238ENST00000638755 ERVK-5Q9HDB9 667 aa13.6□□□□□ -0.23
PAX6-238ENST00000638755 TYW1Q9NV66 732 aaKnown RBP13.6□□□□□ -0.23
PAX6-238ENST00000638755 PUF60Q9UHX1 559 aaKnown RBP13.6□□□□□ -0.23
PAX6-238ENST00000638755 DBR1Q9UK59 544 aaKnown RBP13.6□□□□□ -0.23
PAX6-238ENST00000638755 PADI3Q9ULW8 664 aa13.6□□□□□ -0.23
PAX6-238ENST00000638755 MARK3P27448 753 aa13.59□□□□□ -0.23
PAX6-238ENST00000638755 HAND2P61296 217 aa13.59□□□□□ -0.23
PAX6-238ENST00000638755 IGBP1P78318 339 aa13.59□□□□□ -0.23
PAX6-238ENST00000638755 GRIK4Q16099 956 aa13.59□□□□□ -0.23
PAX6-238ENST00000638755 RARS2Q5T160 578 aaKnown RBP13.59□□□□□ -0.23
PAX6-238ENST00000638755 FAM102BQ5T8I3 360 aa13.59□□□□□ -0.23
PAX6-238ENST00000638755 KANK3Q6NY19 840 aa13.59□□□□□ -0.23
PAX6-238ENST00000638755 PLCD3Q8N3E9 789 aa13.59□□□□□ -0.23
PAX6-238ENST00000638755 C12orf76Q8N812 135 aaPredicted RBP13.59□□□□□ -0.23
PAX6-238ENST00000638755 PNMA1Q8ND90 353 aa13.59□□□□□ -0.23
PAX6-238ENST00000638755 MRPS27Q92552 414 aaKnown RBP13.59□□□□□ -0.23
PAX6-238ENST00000638755 AMNQ9BXJ7 453 aa13.59□□□□□ -0.23
PAX6-238ENST00000638755 RTEL1Q9NZ71 1219 aa13.59□□□□□ -0.23
PAX6-238ENST00000638755 RALYQ9UKM9 306 aaKnown RBP13.59□□□□□ -0.23
PAX6-238ENST00000638755 PCDHA1Q9Y5I3 950 aa13.59□□□□□ -0.23
PAX6-238ENST00000638755 M0QZ92 97 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 CA8P35219 290 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 SARSP49591 514 aaKnown RBP13.58□□□□□ -0.24
PAX6-238ENST00000638755 TMEM266Q2M3C6 531 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 GNPTABQ3T906 1256 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 MARCH8Q5T0T0 291 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 IER5Q5VY09 327 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 TMC7Q7Z402 723 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 MIER1Q8N108 512 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 TMX1Q9H3N1 280 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 NGRNQ9NPE2 291 aaKnown RBP13.58□□□□□ -0.24
PAX6-238ENST00000638755 CYP26B1Q9NR63 512 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 DDX19BQ9UMR2 479 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 LZTS1Q9Y250 596 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 HCFC2Q9Y5Z7 792 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 GPR179Q6PRD1 2367 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 USP24Q9UPU5 2620 aa13.58□□□□□ -0.24
PAX6-238ENST00000638755 MBLAC1A4D2B0 266 aaPredicted RBP13.57□□□□□ -0.24
PAX6-238ENST00000638755 TRIM6-TRIM34B2RNG4 842 aa13.57□□□□□ -0.24
PAX6-238ENST00000638755 SPATA31C2B4DYI2 1134 aa13.57□□□□□ -0.24
PAX6-238ENST00000638755 FGAP02671 866 aa13.57□□□□□ -0.24
PAX6-238ENST00000638755 RFX1P22670 979 aa13.57□□□□□ -0.24
PAX6-238ENST00000638755 TCF7P36402 384 aaPredicted RBP13.57□□□□□ -0.24
PAX6-238ENST00000638755 GHRHRQ02643 423 aa13.57□□□□□ -0.24
PAX6-238ENST00000638755 NFX1Q12986 1120 aaKnown RBP13.57□□□□□ -0.24
PAX6-238ENST00000638755 SEMA3FQ13275 785 aa13.57□□□□□ -0.24
PAX6-238ENST00000638755 TDGQ13569 410 aa13.57□□□□□ -0.24
PAX6-238ENST00000638755 ASPRV1Q53RT3 343 aa13.57□□□□□ -0.24
PAX6-238ENST00000638755 ZC3H14Q6PJT7 736 aaKnown RBP13.57□□□□□ -0.24
PAX6-238ENST00000638755 MFSD6Q6ZSS7 791 aa13.57□□□□□ -0.24
PAX6-238ENST00000638755 KAT14Q9H8E8 782 aa13.57□□□□□ -0.24
PAX6-238ENST00000638755 MAP3K20Q9NYL2 800 aaKnown RBP13.57□□□□□ -0.24
PAX6-238ENST00000638755 TRPV2Q9Y5S1 764 aa13.57□□□□□ -0.24
PAX6-238ENST00000638755 FNDC1Q4ZHG4 1894 aaPredicted RBP13.57□□□□□ -0.24
PAX6-238ENST00000638755 LOXHD1Q8IVV2 1947 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 GCOM1H8Y6P7 765 aaPredicted RBP13.56□□□□□ -0.24
PAX6-238ENST00000638755 PPP1R11O60927 126 aaPredicted RBP13.56□□□□□ -0.24
PAX6-238ENST00000638755 EOMESO95936 686 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 PARP1P09874 1014 aaKnown RBP13.56□□□□□ -0.24
PAX6-238ENST00000638755 POLR2MP0CAP2 368 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 LAG3P18627 525 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 PBX3P40426 434 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 ATXN1P54253 815 aaKnown RBP13.56□□□□□ -0.24
PAX6-238ENST00000638755 MRPS9P82933 396 aaKnown RBP13.56□□□□□ -0.24
PAX6-238ENST00000638755 PLCB3Q01970 1234 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 COL9A2Q14055 689 aaPredicted RBP13.56□□□□□ -0.24
PAX6-238ENST00000638755 ALX1Q15699 326 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 SPECC1Q5M775 1068 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 ATAT1Q5SQI0 421 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 DGKHQ86XP1 1220 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 CHAMP1Q96JM3 812 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 INPP4AQ96PE3 977 aaPredicted RBP13.56□□□□□ -0.24
PAX6-238ENST00000638755 CWH43Q9H720 699 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 USTQ9Y2C2 406 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 SQORQ9Y6N5 450 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 IGSF9BQ9UPX0 1349 aa13.56□□□□□ -0.24
PAX6-238ENST00000638755 DENND3A2RUS2 1198 aa13.55□□□□□ -0.24
PAX6-238ENST00000638755 FIBPO43427 364 aa13.55□□□□□ -0.24
PAX6-238ENST00000638755 MGEA5O60502 916 aa13.55□□□□□ -0.24
PAX6-238ENST00000638755 SP9P0CG40 484 aa13.55□□□□□ -0.24
PAX6-238ENST00000638755 FGFR1P11362 822 aa13.55□□□□□ -0.24
PAX6-238ENST00000638755 PDE4AP27815 886 aa13.55□□□□□ -0.24
PAX6-238ENST00000638755 KRT17Q04695 432 aa13.55□□□□□ -0.24
PAX6-238ENST00000638755 KIAA0319Q5VV43 1072 aa13.55□□□□□ -0.24
PAX6-238ENST00000638755 KIAA1841Q6NSI8 718 aa13.55□□□□□ -0.24
PAX6-238ENST00000638755 GLG1Q92896 1179 aa13.55□□□□□ -0.24
PAX6-238ENST00000638755 ACSF2Q96CM8 615 aaPredicted RBP13.55□□□□□ -0.24
PAX6-238ENST00000638755 CELF4Q9BZC1 486 aaKnown RBP13.55□□□□□ -0.24
PAX6-238ENST00000638755 RNF216Q9NWF9 866 aaPredicted RBP13.55□□□□□ -0.24
PAX6-238ENST00000638755 DUSP12Q9UNI6 340 aa13.55□□□□□ -0.24
PAX6-238ENST00000638755 DCDC2BA2VCK2 349 aa13.54□□□□□ -0.24
PAX6-238ENST00000638755 C2orf71A6NGG8 1288 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms