RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 P3H4Q92791 437 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 JPH2Q9BR39 696 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-208ENST00000638372 RNF146Q9NTX7 359 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 BAZ2BQ9UIF8 2168 aaKnown RBP15.54■□□□□ 0.08
SCARB2-208ENST00000638372 ZNF233A6NK53 670 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 RASA1P20936 1047 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 DYNLT1P63172 113 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 VPS72Q15906 364 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 CACNA2D3Q8IZS8 1091 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 PROM2Q8N271 834 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 NUB1Q9Y5A7 615 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 PNMA6AP0CW24 399 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-208ENST00000638372 EN1Q05925 392 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-208ENST00000638372 ZNF543Q08ER8 600 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 KNOP1Q1ED39 458 aaKnown RBP15.54■□□□□ 0.08
SCARB2-208ENST00000638372 ANKRD40Q6AI12 368 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 ANKRD36BP1Q96IX9 119 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 KCNF1Q9H3M0 494 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 MAD1L1Q9Y6D9 718 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 PALMO75781 387 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 SLCO1A2P46721 670 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 TRIP13Q15645 432 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-208ENST00000638372 NME8Q8N427 588 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 SMC1BQ8NDV3 1235 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 MCUR1Q96AQ8 359 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 TYW1Q9NV66 732 aaKnown RBP15.54■□□□□ 0.08
SCARB2-208ENST00000638372 RNF14Q9UBS8 474 aa15.54■□□□□ 0.08
SCARB2-208ENST00000638372 KIAA1210Q9ULL0 1709 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 PRPF38AQ8NAV1 312 aaKnown RBP15.53■□□□□ 0.08
SCARB2-208ENST00000638372 PPM1EQ8WY54 764 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 ZBTB12Q9Y330 459 aaPredicted RBP15.53■□□□□ 0.08
SCARB2-208ENST00000638372 MYO3BQ8WXR4 1341 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 SALL3Q9BXA9 1300 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 SGK1O00141 431 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 PPP1R18Q6NYC8 613 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 XXYLT1Q8NBI6 393 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 MSTO1Q9BUK6 570 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 SEPT10Q9P0V9 454 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 HDAC6Q9UBN7 1215 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 BAIAP2L1Q9UHR4 511 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 SCAF8Q9UPN6 1271 aaKnown RBP15.53■□□□□ 0.08
SCARB2-208ENST00000638372 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.53■□□□□ 0.08
SCARB2-208ENST00000638372 I3L4J1 428 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 ATP8B1O43520 1251 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 TBC1D31Q96DN5 1066 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 CEP72Q9P209 647 aa15.53■□□□□ 0.08
SCARB2-208ENST00000638372 WDR64B1ANS9 1081 aa15.52■□□□□ 0.08
SCARB2-208ENST00000638372 TLR3O15455 904 aaKnown RBP15.52■□□□□ 0.08
SCARB2-208ENST00000638372 FGGP02679 453 aa15.52■□□□□ 0.08
SCARB2-208ENST00000638372 GKAP1Q5VSY0 366 aaPredicted RBP15.52■□□□□ 0.08
SCARB2-208ENST00000638372 CALN1Q9BXU9 219 aa15.52■□□□□ 0.08
SCARB2-208ENST00000638372 CCSER1Q9C0I3 900 aa15.52■□□□□ 0.08
SCARB2-208ENST00000638372 FAM114A2Q9NRY5 505 aa15.52■□□□□ 0.08
SCARB2-208ENST00000638372 PODXL2Q9NZ53 605 aa15.52■□□□□ 0.08
SCARB2-208ENST00000638372 NFU1Q9UMS0 254 aa15.52■□□□□ 0.08
SCARB2-208ENST00000638372 TRIM49P0CI25 452 aa15.52■□□□□ 0.08
SCARB2-208ENST00000638372 TRIM49CP0CI26 452 aa15.52■□□□□ 0.08
SCARB2-208ENST00000638372 NEDD9Q14511 834 aa15.52■□□□□ 0.08
SCARB2-208ENST00000638372 DNAJC24Q6P3W2 148 aa15.52■□□□□ 0.08
SCARB2-208ENST00000638372 INTS5Q6P9B9 1019 aaKnown RBP15.52■□□□□ 0.08
SCARB2-208ENST00000638372 ZNF668Q96K58 619 aaPredicted RBP15.52■□□□□ 0.08
SCARB2-208ENST00000638372 CRAMP1Q96RY5 1269 aa15.52■□□□□ 0.08
SCARB2-208ENST00000638372 TMEM60Q9H2L4 133 aa15.52■□□□□ 0.08
SCARB2-208ENST00000638372 NDUFB10O96000 172 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 LIG3P49916 1009 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 GYS2P54840 703 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 TROAPQ12815 778 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 STK4Q13043 487 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.52■□□□□ 0.07
SCARB2-208ENST00000638372 RILPQ96NA2 401 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 WDR24Q96S15 920 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 MIS12Q9H081 205 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 FEM1BQ9UK73 627 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 MAP2P11137 1827 aaKnown RBP15.52■□□□□ 0.07
SCARB2-208ENST00000638372 ATP11AP98196 1134 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 SDCCAG8Q86SQ7 713 aaPredicted RBP15.52■□□□□ 0.07
SCARB2-208ENST00000638372 PPFIBP2Q8ND30 876 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 PBKQ96KB5 322 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 CHP1Q99653 195 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 LXNQ9BS40 222 aa15.52■□□□□ 0.07
SCARB2-208ENST00000638372 DNAJC17Q9NVM6 304 aaKnown RBP15.52■□□□□ 0.07
SCARB2-208ENST00000638372 LRRD1A4D1F6 860 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 YWHAGP61981 247 aaKnown RBP eCLIP15.51■□□□□ 0.07
SCARB2-208ENST00000638372 C10orf76Q5T2E6 689 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 NLRP7Q8WX94 980 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 MEGF6O75095 1541 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 CCDC160A6NGH7 325 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 OSBPP22059 807 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 CCDC62Q6P9F0 684 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 LDHDQ86WU2 507 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 MAP7D3Q8IWC1 876 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 EIF2AK1Q9BQI3 630 aaKnown RBP15.51■□□□□ 0.07
SCARB2-208ENST00000638372 DIP2BQ9P265 1576 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 ECEL1O95672 775 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 PHBP35232 272 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 QARSP47897 775 aaKnown RBP15.51■□□□□ 0.07
SCARB2-208ENST00000638372 IREB2P48200 963 aaKnown RBP15.51■□□□□ 0.07
SCARB2-208ENST00000638372 USP11P51784 963 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 ZNF746Q6NUN9 644 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-208ENST00000638372 CDC42EP5Q6NZY7 148 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms