RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SIP14410 1827 aa18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 LCHNA4D1U4 455 aa18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 M0R2N6 131 aa18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 MSH4O15457 936 aa18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 RPLP2P05387 115 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 PSAPP07602 524 aa18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 XBP1P17861 261 aa18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 NEK4P51957 841 aa18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 MRPS6P82932 125 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 MKRN4PQ13434 485 aaPredicted RBP18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 NECAB1Q8N987 351 aa18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 PPM1EQ8WY54 764 aa18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 ARNTL2Q8WYA1 636 aa18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 RAD9AQ99638 391 aa18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 ORC3Q9UBD5 711 aaPredicted RBP18.97■□□□□ 0.63
CACNA1A-259ENST00000638114 MYH9P35579 1960 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 GAS7O60861 476 aa18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 LARGE1O95461 756 aa18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 CTDNEP1O95476 244 aa18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 TDP2O95551 362 aa18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 LPIN1Q14693 890 aa18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 NONOQ15233 471 aaKnown RBP eCLIP18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 ME3Q16798 604 aa18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 MTHFD1LQ6UB35 978 aa18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 KRT25Q7Z3Z0 450 aa18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 USP38Q8NB14 1042 aa18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 PHF20Q9BVI0 1012 aa18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 PCDHA2Q9Y5H9 948 aa18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 PCDHA10Q9Y5I2 948 aa18.96■□□□□ 0.63
CACNA1A-259ENST00000638114 WDR64B1ANS9 1081 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 M0QZ92 97 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 RFXAPO00287 272 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 CHMP2AO43633 222 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 ATP4AP20648 1035 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 KLRC1P26715 233 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 TMEM62Q0P6H9 643 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 INF2Q27J81 1249 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 FBXO47Q5MNV8 452 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 LRCH2Q5VUJ6 765 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 IER5Q5VY09 327 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 TRMT1LQ7Z2T5 733 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 WASF1Q92558 559 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 GTF3C6Q969F1 213 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 GJA10Q969M2 543 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 RIT2Q99578 217 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 TEKT3Q9BXF9 490 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 GJB4Q9NTQ9 266 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 GABBR1Q9UBS5 961 aa18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 MAFBQ9Y5Q3 323 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-259ENST00000638114 A0A0C4DFX4 3053 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 PRUNE2Q8WUY3 3088 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 COL1A2P08123 1366 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 UNC80Q8N2C7 3258 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 CCDC194A0A1B0GVG4 234 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 SMIM35A0A1B0GVV1 85 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 EPOPA6NHQ4 379 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 CCDC85BQ15834 202 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 Q4G0T1 1027 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 ZNF484Q5JVG2 852 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 SPRED2Q7Z698 418 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 MICALL1Q8N3F8 863 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 SLC5A5Q92911 643 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 DISC1Q9NRI5 854 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 INSL6Q9Y581 213 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 TRPV2Q9Y5S1 764 aa18.94■□□□□ 0.62
CACNA1A-259ENST00000638114 CYP3A7-CYP3A51PA0A087WV96 503 aa18.93■□□□□ 0.62
CACNA1A-259ENST00000638114 UPP2O95045 317 aa18.93■□□□□ 0.62
CACNA1A-259ENST00000638114 CYP3A7P24462 503 aa18.93■□□□□ 0.62
CACNA1A-259ENST00000638114 LETM2Q2VYF4 491 aa18.93■□□□□ 0.62
CACNA1A-259ENST00000638114 MOXD1Q6UVY6 613 aa18.93■□□□□ 0.62
CACNA1A-259ENST00000638114 TSHZ1Q6ZSZ6 1077 aa18.93■□□□□ 0.62
CACNA1A-259ENST00000638114 BBXQ8WY36 941 aaPredicted RBP18.93■□□□□ 0.62
CACNA1A-259ENST00000638114 UNC45AQ9H3U1 944 aa18.93■□□□□ 0.62
CACNA1A-259ENST00000638114 DDX25Q9UHL0 483 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-259ENST00000638114 IGSF9BQ9UPX0 1349 aa18.93■□□□□ 0.62
CACNA1A-259ENST00000638114 LINC01553A4QN01 128 aa18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 ZBTB42B2RXF5 422 aa18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 GTPBP6O43824 516 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 CD52P31358 61 aa18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 SFNP31947 248 aa18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 JAK3P52333 1124 aa18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 NME8Q8N427 588 aa18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 OXER1Q8TDS5 423 aa18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 TOP1MTQ969P6 601 aa18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 FAM167AQ96KS9 214 aa18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 YME1L1Q96TA2 773 aa18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 CELF4Q9BZC1 486 aaKnown RBP18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 MTUS1Q9ULD2 1270 aa18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 TRANK1O15050 2925 aa18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 WDR81Q562E7 1941 aa18.92■□□□□ 0.62
CACNA1A-259ENST00000638114 PSMD10O75832 226 aa18.91■□□□□ 0.62
CACNA1A-259ENST00000638114 FDPSP14324 419 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-259ENST00000638114 HTRA4P83105 476 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-259ENST00000638114 PIK3AP1Q6ZUJ8 805 aa18.91■□□□□ 0.62
CACNA1A-259ENST00000638114 MIER3Q7Z3K6 550 aa18.91■□□□□ 0.62
CACNA1A-259ENST00000638114 NEK8Q86SG6 692 aa18.91■□□□□ 0.62
CACNA1A-259ENST00000638114 NSUN7Q8NE18 718 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-259ENST00000638114 MBOAT7Q96N66 472 aa18.91■□□□□ 0.62
CACNA1A-259ENST00000638114 TGS1Q96RS0 853 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms