RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 EARS2Q5JPH6 523 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 FAM109BQ6ICB4 259 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 PPP4R3AQ6IN85 833 aa16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 GPR153Q6NV75 609 aa16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 CNKSR3Q6P9H4 555 aa16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 POTEDQ86YR6 584 aa16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 IL27Q8NEV9 243 aa16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 TMX3Q96JJ7 454 aa16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 FAM167AQ96KS9 214 aa16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 BACH2Q9BYV9 841 aa16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 LAMA2P24043 3122 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 GBF1Q92538 1859 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 IGKV6D-21A0A0A0MT36 114 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 PSMD10O75832 226 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 BAIAP3O94812 1187 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 SLC34A2O95436 690 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 PRKCEQ02156 737 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 TMEM62Q0P6H9 643 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 IKBKEQ14164 716 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 RAB30Q15771 203 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 ZNF484Q5JVG2 852 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 METTL13Q8N6R0 699 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 ETNPPLQ8TBG4 499 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 BBXQ8WY36 941 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 TIFAQ96CG3 184 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 FAM20AQ96MK3 541 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 MBOAT7Q96N66 472 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 SEPT9Q9UHD8 586 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 CEP131Q9UPN4 1083 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 GINS2Q9Y248 185 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 EVPLQ92817 2033 aa16.23■□□□□ 0.19
CACNA1A-249ENST00000637777 NEMFO60524 1076 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 OATP04181 439 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 RPLP2P05387 115 aaKnown RBP16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 KLRC1P26715 233 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 PBX2P40425 430 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 RABGGTBP53611 331 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 ADAM17P78536 824 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 CALCRLQ16602 461 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 MARCH8Q5T0T0 291 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 RASIP1Q5U651 963 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 IER5Q5VY09 327 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 MCTP1Q6DN14 999 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 NCAPH2Q6IBW4 605 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 MTHFD1LQ6UB35 978 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 RDM1Q8NG50 284 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 SEPT8Q92599 483 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 SLC9A7Q96T83 725 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 ZBED2Q9BTP6 218 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 PBX4Q9BYU1 374 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 NRBP2Q9NSY0 501 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 SMC3Q9UQE7 1217 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 MAFBQ9Y5Q3 323 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 CDY2AQ9Y6F7 541 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 COL1A2P08123 1366 aa16.22■□□□□ 0.19
CACNA1A-249ENST00000637777 IGSF9BQ9UPX0 1349 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 MBLAC1A4D2B0 266 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 KIF28PB7ZC32 967 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 H3BQV1 296 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 EFCAB14O75071 495 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 CD2BP2O95400 341 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 CXCL10P02778 98 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 GHRP10912 638 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 MCM7P33993 719 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 MRPS6P82932 125 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 MBTPS1Q14703 1052 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 SLFN12Q8IYM2 578 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 BANK1Q8NDB2 785 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 DBF4BQ8NFT6 615 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 FBXO18Q8NFZ0 1043 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 TNFRSF25Q93038 417 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 PPP1R16BQ96T49 567 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 NOL7Q9UMY1 257 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 PCDHA2Q9Y5H9 948 aa16.21■□□□□ 0.19
CACNA1A-249ENST00000637777 TBX3O15119 743 aa16.2■□□□□ 0.18
CACNA1A-249ENST00000637777 GJB2P29033 226 aa16.2■□□□□ 0.18
CACNA1A-249ENST00000637777 WDR5P61964 334 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-249ENST00000637777 UGCGQ16739 394 aa16.2■□□□□ 0.18
CACNA1A-249ENST00000637777 FAM117BQ6P1L5 589 aa16.2■□□□□ 0.18
CACNA1A-249ENST00000637777 TRAF7Q6Q0C0 670 aa16.2■□□□□ 0.18
CACNA1A-249ENST00000637777 VWCEQ96DN2 955 aa16.2■□□□□ 0.18
CACNA1A-249ENST00000637777 SCLT1Q96NL6 688 aa16.2■□□□□ 0.18
CACNA1A-249ENST00000637777 IFIH1Q9BYX4 1025 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-249ENST00000637777 NKX2-4Q9H2Z4 354 aa16.2■□□□□ 0.18
CACNA1A-249ENST00000637777 FOXP1Q9H334 677 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-249ENST00000637777 KCNMB3Q9NPA1 279 aa16.2■□□□□ 0.18
CACNA1A-249ENST00000637777 TRPV2Q9Y5S1 764 aa16.2■□□□□ 0.18
CACNA1A-249ENST00000637777 LOXHD1Q8IVV2 1947 aa16.19■□□□□ 0.18
CACNA1A-249ENST00000637777 MYO9BQ13459 2157 aa16.19■□□□□ 0.18
CACNA1A-249ENST00000637777 SMIM35A0A1B0GVV1 85 aa16.19■□□□□ 0.18
CACNA1A-249ENST00000637777 ABHD14A-ACY1A0A1B0GW23 586 aa16.19■□□□□ 0.18
CACNA1A-249ENST00000637777 DDX11L8A8MPP1 907 aa16.19■□□□□ 0.18
CACNA1A-249ENST00000637777 DKC1O60832 514 aaKnown RBP eCLIP16.19■□□□□ 0.18
CACNA1A-249ENST00000637777 CHRNA1P02708 482 aa16.19■□□□□ 0.18
CACNA1A-249ENST00000637777 ATP4AP20648 1035 aa16.19■□□□□ 0.18
CACNA1A-249ENST00000637777 TMOD1P28289 359 aa16.19■□□□□ 0.18
CACNA1A-249ENST00000637777 TXKP42681 527 aa16.19■□□□□ 0.18
CACNA1A-249ENST00000637777 TBC1D8BQ0IIM8 1120 aa16.19■□□□□ 0.18
CACNA1A-249ENST00000637777 PPP2R5CQ13362 524 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms