RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 BMP15O95972 392 aa19.31■□□□□ 0.68
CLN6-218ENST00000637223 CD4P01730 458 aa19.31■□□□□ 0.68
CLN6-218ENST00000637223 PRPHP41219 470 aa19.31■□□□□ 0.68
CLN6-218ENST00000637223 FXR2P51116 673 aaKnown RBP eCLIP19.31■□□□□ 0.68
CLN6-218ENST00000637223 IGBP1P78318 339 aa19.31■□□□□ 0.68
CLN6-218ENST00000637223 PRKCEQ02156 737 aa19.31■□□□□ 0.68
CLN6-218ENST00000637223 CYP4A11Q02928 519 aa19.31■□□□□ 0.68
CLN6-218ENST00000637223 FAAP100Q0VG06 881 aa19.31■□□□□ 0.68
CLN6-218ENST00000637223 POTEBQ6S5H4 581 aa19.31■□□□□ 0.68
CLN6-218ENST00000637223 ATP8B4Q8TF62 1192 aa19.31■□□□□ 0.68
CLN6-218ENST00000637223 ATP6V0A1Q93050 837 aa19.31■□□□□ 0.68
CLN6-218ENST00000637223 ZNF396Q96N95 335 aaPredicted RBP19.31■□□□□ 0.68
CLN6-218ENST00000637223 EIF2AK1Q9BQI3 630 aaKnown RBP19.31■□□□□ 0.68
CLN6-218ENST00000637223 TFIP11Q9UBB9 837 aaKnown RBP19.31■□□□□ 0.68
CLN6-218ENST00000637223 NOD1Q9Y239 953 aa19.31■□□□□ 0.68
CLN6-218ENST00000637223 SCN10AQ9Y5Y9 1956 aa19.31■□□□□ 0.68
CLN6-218ENST00000637223 VWA3AA6NCI4 1184 aa19.3■□□□□ 0.68
CLN6-218ENST00000637223 P4HBP07237 508 aaKnown RBP19.3■□□□□ 0.68
CLN6-218ENST00000637223 CLTBP09497 229 aa19.3■□□□□ 0.68
CLN6-218ENST00000637223 INSRRP14616 1297 aa19.3■□□□□ 0.68
CLN6-218ENST00000637223 DDIT3P35638 169 aa19.3■□□□□ 0.68
CLN6-218ENST00000637223 PSMC5P62195 406 aa19.3■□□□□ 0.68
CLN6-218ENST00000637223 CTTNQ14247 550 aaKnown RBP19.3■□□□□ 0.68
CLN6-218ENST00000637223 PTPAQ15257 358 aa19.3■□□□□ 0.68
CLN6-218ENST00000637223 GRIK4Q16099 956 aa19.3■□□□□ 0.68
CLN6-218ENST00000637223 PTGISQ16647 500 aa19.3■□□□□ 0.68
CLN6-218ENST00000637223 SH3RF1Q7Z6J0 888 aa19.3■□□□□ 0.68
CLN6-218ENST00000637223 LMBR1Q8WVP7 490 aa19.3■□□□□ 0.68
CLN6-218ENST00000637223 LXNQ9BS40 222 aa19.3■□□□□ 0.68
CLN6-218ENST00000637223 PDLIM7Q9NR12 457 aa19.3■□□□□ 0.68
CLN6-218ENST00000637223 WRAP73Q9P2S5 460 aaPredicted RBP19.3■□□□□ 0.68
CLN6-218ENST00000637223 LRWD1Q9UFC0 647 aa19.3■□□□□ 0.68
CLN6-218ENST00000637223 UNC80Q8N2C7 3258 aa19.29■□□□□ 0.68
CLN6-218ENST00000637223 HBP1O60381 514 aa19.29■□□□□ 0.68
CLN6-218ENST00000637223 OATP04181 439 aa19.29■□□□□ 0.68
CLN6-218ENST00000637223 CYP2C9P11712 490 aa19.29■□□□□ 0.68
CLN6-218ENST00000637223 QARSP47897 775 aaKnown RBP19.29■□□□□ 0.68
CLN6-218ENST00000637223 ARL6IP4Q66PJ3 421 aaKnown RBP19.29■□□□□ 0.68
CLN6-218ENST00000637223 TPH2Q8IWU9 490 aa19.29■□□□□ 0.68
CLN6-218ENST00000637223 TRAPPC12Q8WVT3 735 aa19.29■□□□□ 0.68
CLN6-218ENST00000637223 FAM167AQ96KS9 214 aa19.29■□□□□ 0.68
CLN6-218ENST00000637223 TMEM39AQ9NV64 488 aa19.29■□□□□ 0.68
CLN6-218ENST00000637223 NRCAMQ92823 1304 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 TMEM150BA6NC51 233 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 PP2D1A8MPX8 630 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 TREHO43280 583 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 SLITRK3O94933 977 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 MARCKSP29966 332 aaPredicted RBP19.28■□□□□ 0.68
CLN6-218ENST00000637223 HOXC8P31273 242 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 IGSF22Q8N9C0 903 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 ERMNQ8TAM6 284 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 BBXQ8WY36 941 aaPredicted RBP19.28■□□□□ 0.68
CLN6-218ENST00000637223 TNPO1Q92973 898 aaKnown RBP19.28■□□□□ 0.68
CLN6-218ENST00000637223 ZBTB10Q96DT7 871 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 CHAMP1Q96JM3 812 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 FAM161BQ96MY7 647 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 GUCD1Q96NT3 240 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 CTAGE1Q96RT6 745 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 HSD17B14Q9BPX1 270 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 RAB34Q9BZG1 259 aa19.28■□□□□ 0.68
CLN6-218ENST00000637223 SEPT9Q9UHD8 586 aaPredicted RBP19.28■□□□□ 0.68
CLN6-218ENST00000637223 TRIM43BA6NCK2 446 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 DDX11L8A8MPP1 907 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 MED24O75448 989 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 STBD1O95210 358 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 GNAT1P11488 350 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 NASPP49321 788 aaPredicted RBP19.27■□□□□ 0.68
CLN6-218ENST00000637223 NUCB2P80303 420 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 DNM1Q05193 864 aaKnown RBP19.27■□□□□ 0.68
CLN6-218ENST00000637223 GRIN1Q05586 938 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 PDIA5Q14554 519 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 STK38Q15208 465 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 XKR3Q5GH77 459 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 NEK9Q8TD19 979 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 TRIM43Q96BQ3 446 aaPredicted RBP19.27■□□□□ 0.68
CLN6-218ENST00000637223 ZSWIM4Q9H7M6 989 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 NRBP2Q9NSY0 501 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 PRKAG2Q9UGJ0 569 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 TBX21Q9UL17 535 aa19.27■□□□□ 0.68
CLN6-218ENST00000637223 RRN3P2A6NIE6 340 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 ZBTB42B2RXF5 422 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 DKC1O60832 514 aaKnown RBP eCLIP19.26■□□□□ 0.67
CLN6-218ENST00000637223 SPATA31C1P0DKV0 1188 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 CDC25AP30304 524 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 ADAM17P78536 824 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 MDM2Q00987 491 aaPredicted RBP19.26■□□□□ 0.67
CLN6-218ENST00000637223 SLC39A14Q15043 492 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 ZNF484Q5JVG2 852 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 MARCH8Q5T0T0 291 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 PLA2G4FQ68DD2 849 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 CATSPER3Q86XQ3 398 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 SNX29Q8TEQ0 813 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 SH2D3AQ9BRG2 576 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 PPP1R12CQ9BZL4 782 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 TUBE1Q9UJT0 475 aa19.26■□□□□ 0.67
CLN6-218ENST00000637223 A0A087WWV3 80 aa19.25■□□□□ 0.67
CLN6-218ENST00000637223 KIAA0355O15063 1070 aa19.25■□□□□ 0.67
CLN6-218ENST00000637223 CCT6AP40227 531 aaKnown RBP19.25■□□□□ 0.67
CLN6-218ENST00000637223 MTERF2Q49AM1 385 aa19.25■□□□□ 0.67
CLN6-218ENST00000637223 HAUS3Q68CZ6 603 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms