RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 SPATA33Q96N06 139 aa10.68□□□□□ -0.7
CACNA1A-236ENST00000637117 UPF3BQ9BZI7 483 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-236ENST00000637117 RNF41Q9H4P4 317 aaPredicted RBP10.68□□□□□ -0.7
CACNA1A-236ENST00000637117 NSUN3Q9H649 340 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-236ENST00000637117 CLDND1Q9NY35 253 aa10.68□□□□□ -0.7
CACNA1A-236ENST00000637117 MICAL3Q7RTP6 2002 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 SALL3Q9BXA9 1300 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 A0A0D9SFI3 127 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 C17orf102A2RUQ5 167 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 NCK2O43639 380 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 DHX16O60231 1041 aaKnown RBP10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 SORBS3O60504 671 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 RGS20O76081 388 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 MYCLP12524 364 aaPredicted RBP10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 CLDN10P78369 228 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 COL19A1Q14993 1142 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 CCDC178Q5BJE1 867 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 ANKRD45Q5TZF3 282 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 TBC1D10CQ8IV04 446 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 ADHFE1Q8IWW8 467 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 ANKS1AQ92625 1134 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 ATP6V0A1Q93050 837 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 MFSD14AQ96MC6 490 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 C16orf70Q9BSU1 422 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 C1QTNF2Q9BXJ5 285 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 KAT14Q9H8E8 782 aa10.67□□□□□ -0.7
CACNA1A-236ENST00000637117 ZMYM6O95789 1325 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 H3BRB1 525 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 ZNF213O14771 459 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 TREHO43280 583 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 GGPS1O95749 300 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 TGFB3P10600 412 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 IRS1P35568 1242 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 LTBRP36941 435 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 ATP1A2P50993 1020 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 SP2Q02086 613 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 ASPRV1Q53RT3 343 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 HFE2Q6ZVN8 426 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 ZNF589Q86UQ0 364 aaPredicted RBP10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 VSIG10LQ86VR7 867 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 IQCA1Q86XH1 822 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 TICAM2Q86XR7 235 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 PDCD2LQ9BRP1 358 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 OSBPL7Q9BZF2 842 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 RNPEPQ9H4A4 650 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 TUT1Q9H6E5 874 aaKnown RBP10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 JMJD4Q9H9V9 463 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 MLXIPQ9HAP2 919 aa10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 DNAAF2Q9NVR5 837 aaKnown RBP10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 MAP3K20Q9NYL2 800 aaKnown RBP10.66□□□□□ -0.7
CACNA1A-236ENST00000637117 OPLAHO14841 1288 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 CAND2O75155 1236 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 RB1P06400 928 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 PARP1P09874 1014 aaKnown RBP10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 SMIM10L2AP0DMW4 78 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 SMIM10L2BP0DMW5 78 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 HSD17B4P51659 736 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 PDE1AP54750 535 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 DPYDQ12882 1025 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 NMIQ13287 307 aaPredicted RBP10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 CTC1Q2NKJ3 1217 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 RNF20Q5VTR2 975 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 STOX1Q6ZVD7 989 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 SND1Q7KZF4 910 aaKnown RBP eCLIP10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 RPAINQ86UA6 219 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 FIBCD1Q8N539 461 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 IL17RAQ96F46 866 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 AMNQ9BXJ7 453 aa10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 IFIH1Q9BYX4 1025 aaKnown RBP10.65□□□□□ -0.7
CACNA1A-236ENST00000637117 NEDD4P46934 1319 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 CCDC171Q6TFL3 1326 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 C5orf67F2Z3F1 127 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 CTSHP09668 335 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 GNAT1P11488 350 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 UBA1P22314 1058 aaKnown RBP10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 HOXC8P31273 242 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 CTNNB1P35222 781 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 BMPR1AP36894 532 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 NT5C2P49902 561 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 SH3BP2P78314 561 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 GHRHRQ02643 423 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 DLX2Q07687 328 aaPredicted RBP10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 PGM5Q15124 567 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 SMAD2Q15796 467 aaKnown RBP10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 CLUL1Q15846 466 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 SAMD3Q8N6K7 520 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 APBB2Q92870 758 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 CLP1Q92989 425 aaKnown RBP10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 ZSCAN10Q96SZ4 725 aaPredicted RBP10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 POP1Q99575 1024 aaKnown RBP10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 USP26Q9BXU7 913 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 BCAS3Q9H6U6 928 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 SETD4Q9NVD3 440 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 ZSWIM5Q9P217 1185 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 MUTYHQ9UIF7 546 aa10.64□□□□□ -0.71
CACNA1A-236ENST00000637117 GRM6O15303 877 aa10.63□□□□□ -0.71
CACNA1A-236ENST00000637117 MBTPS2O43462 519 aa10.63□□□□□ -0.71
CACNA1A-236ENST00000637117 LGALS2P05162 132 aa10.63□□□□□ -0.71
CACNA1A-236ENST00000637117 CCND2P30279 289 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms