RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 SLC16A2P36021 539 aa23.57■■□□□ 1.36
CLN5-215ENST00000636767 STAT3P40763 770 aa23.57■■□□□ 1.36
CLN5-215ENST00000636767 USP8P40818 1118 aa23.57■■□□□ 1.36
CLN5-215ENST00000636767 FRMD5Q7Z6J6 570 aa23.57■■□□□ 1.36
CLN5-215ENST00000636767 DHX36Q9H2U1 1008 aaKnown RBP23.57■■□□□ 1.36
CLN5-215ENST00000636767 KCNMB3Q9NPA1 279 aa23.57■■□□□ 1.36
CLN5-215ENST00000636767 ARMCX3Q9UH62 379 aaPredicted RBP23.57■■□□□ 1.36
CLN5-215ENST00000636767 SLC12A6Q9UHW9 1150 aa23.57■■□□□ 1.36
CLN5-215ENST00000636767 GGA2Q9UJY4 613 aa23.57■■□□□ 1.36
CLN5-215ENST00000636767 POTEFA5A3E0 1075 aa23.56■■□□□ 1.36
CLN5-215ENST00000636767 H0YHG0 523 aa23.56■■□□□ 1.36
CLN5-215ENST00000636767 POTEIP0CG38 1075 aa23.56■■□□□ 1.36
CLN5-215ENST00000636767 PRKCIP41743 596 aa23.56■■□□□ 1.36
CLN5-215ENST00000636767 EXOC3L4Q17RC7 722 aa23.56■■□□□ 1.36
CLN5-215ENST00000636767 POTEGQ6S5H5 508 aa23.56■■□□□ 1.36
CLN5-215ENST00000636767 POTEEQ6S8J3 1075 aa23.56■■□□□ 1.36
CLN5-215ENST00000636767 ARHGEF1Q92888 912 aaKnown RBP23.56■■□□□ 1.36
CLN5-215ENST00000636767 PPANQ9NQ55 473 aaKnown RBP23.56■■□□□ 1.36
CLN5-215ENST00000636767 TRAF3IP3Q9Y228 551 aa23.56■■□□□ 1.36
CLN5-215ENST00000636767 USP17L10C9JJH3 530 aa23.56■■□□□ 1.36
CLN5-215ENST00000636767 ZBTB5O15062 677 aa23.56■■□□□ 1.36
CLN5-215ENST00000636767 TTLL1O95922 423 aa23.56■■□□□ 1.36
CLN5-215ENST00000636767 FLT3P36888 993 aa23.56■■□□□ 1.36
CLN5-215ENST00000636767 PICALMQ13492 652 aa23.56■■□□□ 1.36
CLN5-215ENST00000636767 AJAP1Q9UKB5 411 aaPredicted RBP23.56■■□□□ 1.36
CLN5-215ENST00000636767 MNAT1P51948 309 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 KCTD19Q17RG1 926 aaPredicted RBP23.55■■□□□ 1.36
CLN5-215ENST00000636767 CYFIP2Q96F07 1278 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 CABS1Q96KC9 395 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 SWAP70Q9UH65 585 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 FBXL5Q9UKA1 691 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 STXBP5LQ9Y2K9 1186 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 TMCO5BA8MYB1 307 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 CCDC188H7C350 402 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 KRIT1O00522 736 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 ATP8B3O60423 1300 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 FLOT1O75955 427 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 ITGA4P13612 1032 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 HOXD13P35453 343 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 RNF187Q5TA31 235 aaPredicted RBP23.55■■□□□ 1.36
CLN5-215ENST00000636767 C6orf89Q6UWU4 347 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 SLFN11Q7Z7L1 901 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 SLF2Q8IX21 1173 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 RASGEF1CQ8N431 466 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 NAP1L4Q99733 375 aaKnown RBP23.55■■□□□ 1.36
CLN5-215ENST00000636767 DAGLAQ9Y4D2 1042 aa23.55■■□□□ 1.36
CLN5-215ENST00000636767 USP17L15C9J2P7 530 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 USP17L13C9JLJ4 530 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 USP17L11C9JVI0 530 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 USP17L18D6R9N7 530 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 USP17L22D6RA61 530 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 USP17L17D6RBQ6 530 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 USP17L19D6RCP7 530 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 USP17L20D6RJB6 530 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 SLC26A4O43511 780 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 USP17L24Q0WX57 530 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 IFT88Q13099 833 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 BIRC3Q13489 604 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 EPHA7Q15375 998 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 KNOP1Q1ED39 458 aaKnown RBP23.54■■□□□ 1.36
CLN5-215ENST00000636767 USP17L6PQ6QN14 398 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 PEX26Q7Z412 305 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 SIX2Q9NPC8 291 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 AMACRQ9UHK6 382 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 RTCBQ9Y3I0 505 aaKnown RBP23.54■■□□□ 1.36
CLN5-215ENST00000636767 RFC4P35249 363 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 GIT2Q14161 759 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 UBLCP1Q8WVY7 318 aaPredicted RBP23.54■■□□□ 1.36
CLN5-215ENST00000636767 VCPKMTQ9H867 229 aa23.54■■□□□ 1.36
CLN5-215ENST00000636767 DAPK3O43293 454 aa23.53■■□□□ 1.36
CLN5-215ENST00000636767 XRCC5P13010 732 aaKnown RBP23.53■■□□□ 1.36
CLN5-215ENST00000636767 JAM2P57087 298 aa23.53■■□□□ 1.36
CLN5-215ENST00000636767 IRX3P78415 501 aaPredicted RBP23.53■■□□□ 1.36
CLN5-215ENST00000636767 PPARDQ03181 441 aa23.53■■□□□ 1.36
CLN5-215ENST00000636767 DCAF17Q5H9S7 520 aaPredicted RBP23.53■■□□□ 1.36
CLN5-215ENST00000636767 KCTD1Q719H9 257 aa23.53■■□□□ 1.36
CLN5-215ENST00000636767 EPM2AIP1Q7L775 607 aaPredicted RBP23.53■■□□□ 1.36
CLN5-215ENST00000636767 SFR1Q86XK3 245 aa23.53■■□□□ 1.36
CLN5-215ENST00000636767 SUCLA2Q9P2R7 463 aaPredicted RBP23.53■■□□□ 1.36
CLN5-215ENST00000636767 AKAP3O75969 853 aa23.52■■□□□ 1.36
CLN5-215ENST00000636767 ANXA13P27216 316 aa23.52■■□□□ 1.36
CLN5-215ENST00000636767 ACTN3Q08043 901 aaPredicted RBP23.52■■□□□ 1.36
CLN5-215ENST00000636767 MTMR3Q13615 1198 aa23.52■■□□□ 1.36
CLN5-215ENST00000636767 RUFY4Q6ZNE9 571 aa23.52■■□□□ 1.36
CLN5-215ENST00000636767 SLITRK6Q9H5Y7 841 aa23.52■■□□□ 1.36
CLN5-215ENST00000636767 C10orf71Q711Q0 1435 aa23.52■■□□□ 1.36
CLN5-215ENST00000636767 A0A0A6YYK5 440 aaPredicted RBP23.52■■□□□ 1.36
CLN5-215ENST00000636767 H2AFZP0C0S5 128 aa23.52■■□□□ 1.36
CLN5-215ENST00000636767 PSMC6P62333 389 aa23.52■■□□□ 1.36
CLN5-215ENST00000636767 H2AFVQ71UI9 128 aa23.52■■□□□ 1.36
CLN5-215ENST00000636767 TMC3Q7Z5M5 1100 aa23.52■■□□□ 1.36
CLN5-215ENST00000636767 REEP2Q9BRK0 252 aa23.52■■□□□ 1.36
CLN5-215ENST00000636767 GMNCA6NCL1 334 aa23.51■■□□□ 1.35
CLN5-215ENST00000636767 TRAPPC3O43617 180 aa23.51■■□□□ 1.35
CLN5-215ENST00000636767 ATP2B4P23634 1241 aa23.51■■□□□ 1.35
CLN5-215ENST00000636767 TMOD1P28289 359 aa23.51■■□□□ 1.35
CLN5-215ENST00000636767 SPIRE1Q08AE8 756 aa23.51■■□□□ 1.35
CLN5-215ENST00000636767 GPATCH4Q5T3I0 446 aaKnown RBP23.51■■□□□ 1.35
CLN5-215ENST00000636767 AGBL2Q5U5Z8 902 aa23.51■■□□□ 1.35
CLN5-215ENST00000636767 NT5DC3Q86UY8 548 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms