RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 TSGA10IPQ3SY00 556 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 SGO2Q562F6 1265 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 OR6B2Q6IFH4 312 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 BBS5Q8N3I7 341 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 GPATCH11Q8N954 259 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 CDKL2Q92772 493 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 SPTLC3Q9NUV7 552 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 SLC12A6Q9UHW9 1150 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 IPO11Q9UI26 975 aaKnown RBP8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 ADAMTS13Q76LX8 1427 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 A0A0G2JLW4 131 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 E9PMD0 336 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 ATP1A3P13637 1013 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 ARPP19P56211 112 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 ARMCX2Q7L311 632 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 SIX6OS1Q8N1H7 587 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 RABGGTAQ92696 567 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 HINFPQ9BQA5 517 aa8.38□□□□□ -1.07
SMARCA2-252ENST00000636559 USP42Q9H9J4 1324 aaKnown RBP8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 PXDNLA1KZ92 1463 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 CLDN3O15551 220 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 ARL4AP40617 200 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 YWHAGP61981 247 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 MAPK6Q16659 721 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 THNSL1Q8IYQ7 743 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 PROM2Q8N271 834 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 DAGLAQ9Y4D2 1042 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 POTEB3A0JP26 581 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 POTECB2RU33 542 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 FTCDO95954 541 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 NFX1Q12986 1120 aaKnown RBP8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 POTEBQ6S5H4 581 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 MXD3Q9BW11 206 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 ACAD9Q9H845 621 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 ZNF302Q9NR11 478 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 FAM114A2Q9NRY5 505 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 DAAM1Q9Y4D1 1078 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 SPATA31A5Q5VU36 1347 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 PHLPP2Q6ZVD8 1323 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 SPATA31A7Q8IWB4 1347 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 MCF2LO15068 1137 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 P4HBP07237 508 aaKnown RBP8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 GARSP41250 739 aaKnown RBP8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 ARHGAP25P42331 645 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 SNX1Q13596 522 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 TTLL4Q14679 1199 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 PLCB4Q15147 1175 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 DSTYKQ6XUX3 929 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 KCTD6Q8NC69 237 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 CCNYQ8ND76 341 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 SCYL1Q96KG9 808 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 MMP19Q99542 508 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 KIAA1586Q9HCI6 787 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 PVALEFA0A1B0GWK0 134 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 SRGAP2BP0DMP2 458 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 PHKA2P46019 1235 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 QARSP47897 775 aaKnown RBP8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 GABPB1Q06547 395 aaPredicted RBP8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 STAG2Q8N3U4 1231 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 PBKQ96KB5 322 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 OSBPL5Q9H0X9 879 aaPredicted RBP8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 RPAP3Q9H6T3 665 aaPredicted RBP8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 NR3C1P04150 777 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 SAT1P21673 171 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 CASP1P29466 404 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 COASYQ13057 564 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 NKX1-1Q15270 411 aaPredicted RBP8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 PHLDB2Q86SQ0 1253 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 MTRQ99707 1265 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 CALN1Q9BXU9 219 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 GOLPH3LQ9H4A5 285 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 JRKLQ9Y4A0 524 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 TACC3Q9Y6A5 838 aa8.37□□□□□ -1.07
SMARCA2-252ENST00000636559 IPO5O00410 1097 aaKnown RBP8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 BUB1BO60566 1050 aaPredicted RBP8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 USP11P51784 963 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 C4orf50Q6ZRC1 276 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 XXYLT1Q8NBI6 393 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 ZNF512BQ96KM6 892 aaPredicted RBP8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 FLT1P17948 1338 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 PRPSAP2O60256 369 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 NTSR2O95665 410 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 FCER1AP12319 257 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 ANXA13P27216 316 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 CXCR5P32302 372 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 STAT3P40763 770 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 TNFAIP2Q03169 654 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 ITPK1Q13572 414 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 RPS6KA2Q15349 733 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 ZNF667Q5HYK9 610 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 SWSAP1Q6NVH7 229 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 ZNF710Q8N1W2 664 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 GABBR1Q9UBS5 961 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 RNF14Q9UBS8 474 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 ECEL1O95672 775 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 DYNLT1P63172 113 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 APBA1Q02410 837 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 FMR1NBQ8N0W7 255 aaPredicted RBP8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 KIDINS220Q9ULH0 1771 aa8.36□□□□□ -1.07
SMARCA2-252ENST00000636559 POTEFA5A3E0 1075 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms