RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 PAEPP09466 180 aa16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 COPB2P35606 906 aa16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 DCAF17Q5H9S7 520 aaPredicted RBP16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 AGBL2Q5U5Z8 902 aa16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 GIMAP7Q8NHV1 300 aa16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 GPCPD1Q9NPB8 672 aa16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 ATP8A1Q9Y2Q0 1164 aa16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 PPP1R11O60927 126 aaPredicted RBP16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 PLA2G4BP0C869 781 aa16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 BTDP43251 543 aa16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 NEDD9Q14511 834 aa16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 DAAM2Q86T65 1068 aa16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 CCDC65Q8IXS2 484 aa16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 PSMD1Q99460 953 aa16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 PNMA2Q9UL42 364 aa16.35■□□□□ 0.21
THUMPD1-206ENST00000636554 F8W031 263 aaPredicted RBP16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 CYP11B2P19099 503 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 PON1P27169 355 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 NT5C2P49902 561 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 MTMR3Q13615 1198 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 E2F5Q15329 346 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 ADAT2Q7Z6V5 191 aaKnown RBP16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 LINC00116Q8NCU8 138 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 C3orf20Q8ND61 904 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 SGSM3Q96HU1 749 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 NLRP3Q96P20 1036 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 BMP2KQ9NSY1 1161 aaPredicted RBP16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 PCDHA12Q9UN75 941 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 KCNQ2O43526 872 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 SHBGP04278 402 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 DRD4P21917 467 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 STAT3P40763 770 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 GKAP1Q5VSY0 366 aaPredicted RBP16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 CPLX4Q7Z7G2 160 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 NT5DC3Q86UY8 548 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 ATP8B4Q8TF62 1192 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 N4BP2L2Q92802 583 aaPredicted RBP16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 OSGEPQ9NPF4 335 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 STXBP5LQ9Y2K9 1186 aa16.34■□□□□ 0.21
THUMPD1-206ENST00000636554 CCDC188H7C350 402 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 CETN3O15182 167 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 CAND2O75155 1236 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 FGGP02679 453 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 IFFO1Q0D2I5 559 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 SEPT2Q15019 361 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 EXOC3L4Q17RC7 722 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 WLSQ5T9L3 541 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 ZC3H3Q8IXZ2 948 aaKnown RBP16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 RASGEF1CQ8N431 466 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 WDR66Q8TBY9 1149 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 CCT6BQ92526 530 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 HVCN1Q96D96 273 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 ZNF287Q9HBT7 754 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 ANKIB1Q9P2G1 1089 aa16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.33■□□□□ 0.21
THUMPD1-206ENST00000636554 POTEFA5A3E0 1075 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 KRT18P05783 430 aaKnown RBP16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 POTEIP0CG38 1075 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 ELF1P32519 619 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 PPP4CP60510 307 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 DDB1Q16531 1140 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 IFI16Q16666 785 aaKnown RBP16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 SLC10A5Q5PT55 438 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 C10orf76Q5T2E6 689 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 DCAF12L1Q5VU92 463 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 POTEGQ6S5H5 508 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 POTEEQ6S8J3 1075 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 TEX11Q8IYF3 940 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 MARCH10Q8NA82 808 aaPredicted RBP16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 SLITRK6Q9H5Y7 841 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 SRP68Q9UHB9 627 aaKnown RBP16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 ODF2LQ9ULJ1 636 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 NENFQ9UMX5 172 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 COL5A3P25940 1745 aaPredicted RBP16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 DDX3XO00571 662 aaKnown RBP eCLIP16.33■□□□□ 0.29e-18■■■□□ 18.9
THUMPD1-206ENST00000636554 FLOT1O75955 427 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 SMARCA1P28370 1054 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 RFC4P35249 363 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 ARSHQ5FYA8 562 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 UBAP2Q5T6F2 1119 aaKnown RBP16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 TCERG1LQ5VWI1 586 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 SLFN11Q7Z7L1 901 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 SEC14L1Q92503 715 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 BCAS3Q9H6U6 928 aa16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 ARMCX3Q9UH62 379 aaPredicted RBP16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 UTP11Q9Y3A2 253 aaKnown RBP16.33■□□□□ 0.2
THUMPD1-206ENST00000636554 CTNND1O60716 968 aaKnown RBP16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 AFPP02771 609 aaKnown RBP16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 HOXD13P35453 343 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 POU5F1Q01860 360 aaKnown RBP16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 NBPF5PQ86XG9 351 aaPredicted RBP16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 U2AF1L4Q8WU68 220 aaKnown RBP16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 FMO2Q99518 471 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 EPB41L4BQ9H329 900 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 ERVK-5Q9HDB9 667 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 SUCLA2Q9P2R7 463 aaPredicted RBP16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 SUFUQ9UMX1 484 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 SMIM23A6NLE4 172 aa16.32■□□□□ 0.2
THUMPD1-206ENST00000636554 C21orf2O43822 256 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms