RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	EDIL3	O43854	480 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	PRCP	P42785	496 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CKAP4	Q07065	602 aa	Known RBP	11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	EHBP1	Q8NDI1	1231 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	OR8K1	Q8NGG5	319 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	SGSM3	Q96HU1	749 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	P2RX7	Q99572	595 aa	Known RBP	11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	LRRC27	Q9C0I9	530 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	KLC4	Q9NSK0	619 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	MYH4	Q9Y623	1939 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	SPDYE5	A6NIY4	337 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	SRRM3	A6NNA2	597 aa	Predicted RBP	11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	LGALS16	A8MUM7	142 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	MYO1F	O00160	1098 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	OR52Z1	P0C646	297 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CASP1	P29466	404 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	FXR1	P51114	621 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	PTPN21	Q16825	1174 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	LETM2	Q2VYF4	491 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	TREML2	Q5T2D2	321 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CATSPERG	Q6ZRH7	1159 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	MB21D1	Q8N884	522 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CPLX3	Q8WVH0	158 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	OPTN	Q96CV9	577 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	ATG4C	Q96DT6	458 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	SELENOO	Q9BVL4	669 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	HAUS4	Q9H6D7	363 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	SLC38A10	Q9HBR0	1119 aa		11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	RAVER2	Q9HCJ3	691 aa	Known RBP	11.75	□□□□□ -0.53
ARHGEF9-223	ENST00000636102		A0A1B0GUA9	196 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	VWA5A	O00534	786 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CCNT1	O60563	726 aa	Known RBP	11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	RASSF9	O75901	435 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	ICAM1	P05362	532 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	HOXA13	P31271	388 aa	Predicted RBP	11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	DSG3	P32926	999 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	KRT9	P35527	623 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CCT6A	P40227	531 aa	Known RBP	11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	KRT83	P78385	493 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	UBXN1	Q04323	297 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	COG2	Q14746	738 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	NAALADL2	Q58DX5	795 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	NEK8	Q86SG6	692 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	SLC10A4	Q96EP9	437 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	C7orf25	Q9BPX7	421 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	TRIM6	Q9C030	488 aa	Predicted RBP	11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	VPS16	Q9H269	839 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	FAM184B	Q9ULE4	1060 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CCPG1	Q9ULG6	757 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	LUC7L2	Q9Y383	392 aa	Known RBP	11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	KLHL33	A6NCF5	533 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	NDUFAB1	O14561	156 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	ZBED4	O75132	1171 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	FGFR1OP	O95684	399 aa	Known RBP	11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	ACTN3	Q08043	901 aa	Predicted RBP	11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	SKIDA1	Q1XH10	827 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	FIGN	Q5HY92	759 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CNNM4	Q6P4Q7	775 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	FOXR2	Q6PJQ5	311 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CABP7	Q86V35	215 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	RIN2	Q8WYP3	895 aa	Predicted RBP	11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	STAM	Q92783	540 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CALML4	Q96GE6	196 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	DNAJC7	Q99615	494 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	RAB34	Q9BZG1	259 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	GLT8D2	Q9H1C3	349 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CD248	Q9HCU0	757 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CAPN11	Q9UMQ6	739 aa		11.74	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	POLR2A	P24928	1970 aa	Known RBP	11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CXCL11	O14625	94 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	KLRC4	O43908	158 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CELF2	O95319	508 aa	Known RBP	11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CFB	P00751	764 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CCNE1	P24864	410 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	GJA5	P36382	358 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	TRAF1	Q13077	416 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CEP85L	Q5SZL2	805 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	EMC10	Q5UCC4	262 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	ALS2CL	Q60I27	953 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	NCAPH2	Q6IBW4	605 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	GADL1	Q6ZQY3	521 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	AEN	Q8WTP8	325 aa	Known RBP	11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	TRIM47	Q96LD4	638 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	TMEM60	Q9H2L4	133 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	TAB2	Q9NYJ8	693 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	STK17A	Q9UEE5	414 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	MRPL11	Q9Y3B7	192 aa	Known RBP	11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	ABCB11	O95342	1321 aa		11.73	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	SCN4A	P35499	1836 aa		11.72	□□□□□ -0.53
ARHGEF9-223	ENST00000636102		A0A0G2JLL6	359 aa	Predicted RBP	11.72	□□□□□ -0.53
ARHGEF9-223	ENST00000636102		A0A0U1RQJ8	604 aa		11.72	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	RTN2	O75298	545 aa		11.72	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	CLSTN1	O94985	981 aa		11.72	□□□□□ -0.53
ARHGEF9-223	ENST00000636102	ITGBL1	O95965	494 aa	Predicted RBP	11.72	□□□□□ -0.53

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