RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 DEFB118Q96PH6 123 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 ABHD16BQ9H3Z7 469 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 PCDHA6Q9UN73 950 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 PCDHA8Q9Y5H6 950 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 ITIH6Q6UXX5 1313 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 DOCK5Q9H7D0 1870 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 A0A0U1RQG5 324 aaPredicted RBP17.19■□□□□ 0.34
CLN8-209ENST00000635970 POTEFA5A3E0 1075 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 SPDYE3A6NKU9 549 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 BMP15O95972 392 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 NR3C2P08235 984 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 SOX10P56693 466 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 RAD51AP2Q09MP3 1159 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 ZSCAN26Q16670 478 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 TMEM63BQ5T3F8 832 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 REXO1Q8N1G1 1221 aaKnown RBP17.19■□□□□ 0.34
CLN8-209ENST00000635970 SERTAD1Q9UHV2 236 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 ADAM21Q9UKJ8 722 aa17.19■□□□□ 0.34
CLN8-209ENST00000635970 DNAH12Q6ZR08 3092 aa17.18■□□□□ 0.34
CLN8-209ENST00000635970 LOC102724159A0A0B4J2E5 919 aa17.18■□□□□ 0.34
CLN8-209ENST00000635970 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.18■□□□□ 0.34
CLN8-209ENST00000635970 ACTN4O43707 911 aaKnown RBP17.18■□□□□ 0.34
CLN8-209ENST00000635970 IVLP07476 585 aa17.18■□□□□ 0.34
CLN8-209ENST00000635970 GNA11P29992 359 aa17.18■□□□□ 0.34
CLN8-209ENST00000635970 TOB1P50616 345 aaPredicted RBP17.18■□□□□ 0.34
CLN8-209ENST00000635970 PWP2Q15269 919 aaKnown RBP17.18■□□□□ 0.34
CLN8-209ENST00000635970 TAPT1Q6NXT6 567 aa17.18■□□□□ 0.34
CLN8-209ENST00000635970 DIS3L2Q8IYB7 885 aaKnown RBP17.18■□□□□ 0.34
CLN8-209ENST00000635970 IWS1Q96ST2 819 aa17.18■□□□□ 0.34
CLN8-209ENST00000635970 MPHOSPH6Q99547 160 aaKnown RBP17.18■□□□□ 0.34
CLN8-209ENST00000635970 PHF20Q9BVI0 1012 aa17.18■□□□□ 0.34
CLN8-209ENST00000635970 ANO3Q9BYT9 981 aa17.18■□□□□ 0.34
CLN8-209ENST00000635970 CTAGE9A4FU28 777 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 SEPT4O43236 478 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 PBX1P40424 430 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 ADCYAP1R1P41586 468 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 DDX20Q9UHI6 824 aaKnown RBP17.17■□□□□ 0.34
CLN8-209ENST00000635970 PCDHA4Q9UN74 947 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 BTBD18B2RXH4 712 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 MRPS9P82933 396 aaKnown RBP17.17■□□□□ 0.34
CLN8-209ENST00000635970 STXBP2Q15833 593 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 WHAMMP3Q1A5X7 153 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 BEND6Q5SZJ8 279 aaPredicted RBP17.17■□□□□ 0.34
CLN8-209ENST00000635970 TMTC1Q8IUR5 882 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 IGSF22Q8N9C0 903 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 NEK11Q8NG66 645 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 U2AF1L4Q8WU68 220 aaKnown RBP17.17■□□□□ 0.34
CLN8-209ENST00000635970 GSDMAQ96QA5 445 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 GLT8D2Q9H1C3 349 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 ACBD3Q9H3P7 528 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 VTA1Q9NP79 307 aa17.17■□□□□ 0.34
CLN8-209ENST00000635970 RPS6KA5O75582 802 aa17.16■□□□□ 0.34
CLN8-209ENST00000635970 AKR1A1P14550 325 aa17.16■□□□□ 0.34
CLN8-209ENST00000635970 CAPN2P17655 700 aa17.16■□□□□ 0.34
CLN8-209ENST00000635970 XBP1P17861 261 aa17.16■□□□□ 0.34
CLN8-209ENST00000635970 CCND2P30279 289 aa17.16■□□□□ 0.34
CLN8-209ENST00000635970 AP3B2Q13367 1082 aa17.16■□□□□ 0.34
CLN8-209ENST00000635970 TRIM14Q14142 442 aa17.16■□□□□ 0.34
CLN8-209ENST00000635970 GJC2Q5T442 439 aaPredicted RBP17.16■□□□□ 0.34
CLN8-209ENST00000635970 LHX8Q68G74 356 aa17.16■□□□□ 0.34
CLN8-209ENST00000635970 SEPT14Q6ZU15 432 aa17.16■□□□□ 0.34
CLN8-209ENST00000635970 VSIG10LQ86VR7 867 aa17.16■□□□□ 0.34
CLN8-209ENST00000635970 BLIDQ8IZY5 108 aa17.16■□□□□ 0.34
CLN8-209ENST00000635970 OXER1Q8TDS5 423 aa17.16■□□□□ 0.34
CLN8-209ENST00000635970 TMEM106CQ9BVX2 250 aa17.16■□□□□ 0.34
CLN8-209ENST00000635970 MRPL44Q9H9J2 332 aaKnown RBP17.16■□□□□ 0.34
CLN8-209ENST00000635970 SAMSN1Q9NSI8 373 aaKnown RBP17.16■□□□□ 0.34
CLN8-209ENST00000635970 B4DLN1 442 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 M0R2N6 131 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 RGS20O76081 388 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 GJB1P08034 283 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 ACTN2P35609 894 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 CDKAL1Q5VV42 579 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 APTXQ7Z2E3 356 aaKnown RBP17.15■□□□□ 0.34
CLN8-209ENST00000635970 DAGLBQ8NCG7 672 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 PYM1Q9BRP8 204 aaKnown RBP17.15■□□□□ 0.34
CLN8-209ENST00000635970 MFAP3LO75121 409 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 ARIH2O95376 493 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 PCNX4Q63HM2 1172 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 SH3RF1Q7Z6J0 888 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 EPC1Q9H2F5 836 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 ANKZF1Q9H8Y5 726 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 FEZ2Q9UHY8 353 aaPredicted RBP17.15■□□□□ 0.34
CLN8-209ENST00000635970 FAM184BQ9ULE4 1060 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 L1RE1Q9UN81 338 aa17.15■□□□□ 0.34
CLN8-209ENST00000635970 SOWAHDA6NJG2 315 aa17.14■□□□□ 0.33
CLN8-209ENST00000635970 SGPL1O95470 568 aa17.14■□□□□ 0.33
CLN8-209ENST00000635970 FOSP01100 380 aaPredicted RBP17.14■□□□□ 0.33
CLN8-209ENST00000635970 PRR29P0C7W0 189 aa17.14■□□□□ 0.33
CLN8-209ENST00000635970 SMPD1P17405 629 aa17.14■□□□□ 0.33
CLN8-209ENST00000635970 EN2P19622 333 aaPredicted RBP17.14■□□□□ 0.33
CLN8-209ENST00000635970 MCM3P25205 808 aa17.14■□□□□ 0.33
CLN8-209ENST00000635970 GJA8P48165 433 aa17.14■□□□□ 0.33
CLN8-209ENST00000635970 SPAG1Q07617 926 aa17.14■□□□□ 0.33
CLN8-209ENST00000635970 RBL2Q08999 1139 aa17.14■□□□□ 0.33
CLN8-209ENST00000635970 KARSQ15046 597 aaKnown RBP17.14■□□□□ 0.33
CLN8-209ENST00000635970 LEKR1Q6ZMV7 388 aa17.14■□□□□ 0.33
CLN8-209ENST00000635970 FERMT2Q96AC1 680 aa17.14■□□□□ 0.33
CLN8-209ENST00000635970 DESI2Q9BSY9 194 aa17.14■□□□□ 0.33
CLN8-209ENST00000635970 CAPN15O75808 1086 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms