RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 KRT6AP02538 564 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 KRT6BP04259 564 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 ATP1A1P05023 1023 aaKnown RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 ARFIP2P53365 341 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 EIF3BP55884 814 aaKnown RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 GALNT6Q8NCL4 622 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 FNDC8Q8TC99 324 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 DIS3LQ8TF46 1054 aaKnown RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 MAELQ96JY0 434 aaKnown RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 USP28Q96RU2 1077 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 HAPLN3Q96S86 360 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 CAAP1Q9H8G2 361 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 STX8Q9UNK0 236 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 TRIM35Q9UPQ4 493 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 SPG7Q9UQ90 795 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 ZNF652Q9Y2D9 606 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 MAGI3Q5TCQ9 1506 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 AFF2P51816 1311 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 MBD5Q9P267 1494 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 ARAP3Q8WWN8 1544 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 ARHGEF12Q9NZN5 1544 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 RASA4BC9J798 803 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 RASA4O43374 803 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 MFAP3LO75121 409 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 LARGE1O95461 756 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 CAPN1P07384 714 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 VARSP26640 1264 aaKnown RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 MTHFSP49914 203 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 NDUFA8P51970 172 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 MED21Q13503 144 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 KRT32Q14532 448 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 CWF19L2Q2TBE0 894 aaKnown RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 C6orf118Q5T5N4 469 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 TSHZ3Q63HK5 1081 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 CYP4X1Q8N118 509 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 TESK2Q96S53 571 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 Q9H521 79 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 ZC4H2Q9NQZ6 224 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 CLIC5Q9NZA1 410 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 TNRQ92752 1358 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 ZNF233A6NK53 670 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 A8MUI8 341 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 RGS16O15492 202 aaPredicted RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 ZBED1O96006 694 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 CHEK2O96017 543 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 ABL1P00519 1130 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 TFRCP02786 760 aaKnown RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 LYNP07948 512 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 CDH3P22223 829 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 ATP5DP30049 168 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 PPARGP37231 505 aaPredicted RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 IFNAR2P48551 515 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 GPC3P51654 580 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 KIF23Q02241 960 aaPredicted RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 EAPPQ56P03 285 aaPredicted RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 FYB2Q5VWT5 728 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 FAM47EQ6ZV65 393 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 MCF2L2Q86YR7 1114 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 TMEM139Q8IV31 216 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 RHOT2Q8IXI1 618 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 NGDNQ8NEJ9 315 aaKnown RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 GSDMBQ8TAX9 411 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 DDX54Q8TDD1 881 aaKnown RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 STARD8Q92502 1023 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 RPGRQ92834 1020 aaKnown RBP6.57□□□□□ -1.36
CHD2-221ENST00000635856 ANKRD2Q9GZV1 360 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 NMRK1Q9NWW6 199 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 CABP1Q9NZU7 370 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 TSKSQ9UJT2 592 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 ATP11BQ9Y2G3 1177 aa6.57□□□□□ -1.36
CHD2-221ENST00000635856 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.56□□□□□ -1.36
CHD2-221ENST00000635856 CCDC169A6NNP5 214 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 O00370 1275 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 KRT5P13647 590 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 ATF3P18847 181 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 IGHMBP2P38935 993 aaKnown RBP6.56□□□□□ -1.36
CHD2-221ENST00000635856 ETV3P41162 512 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 RELAQ04206 551 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 SPAG1Q07617 926 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 RESTQ13127 1097 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 WASHC4Q2M389 1173 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 NEK5Q6P3R8 708 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 SLC4A10Q6U841 1118 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 TMTC3Q6ZXV5 915 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 FMR1NBQ8N0W7 255 aaPredicted RBP6.56□□□□□ -1.36
CHD2-221ENST00000635856 SPATA4Q8NEY3 305 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 SNX29Q8TEQ0 813 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 OTUD5Q96G74 571 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 ZNF184Q99676 751 aaPredicted RBP6.56□□□□□ -1.36
CHD2-221ENST00000635856 STK33Q9BYT3 514 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 ASCC2Q9H1I8 757 aaPredicted RBP6.56□□□□□ -1.36
CHD2-221ENST00000635856 EHMT1Q9H9B1 1298 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 INIPQ9NRY2 104 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 GIN1Q9NXP7 522 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 RNF14Q9UBS8 474 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 GGT7Q9UJ14 662 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 TACC3Q9Y6A5 838 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 ZC3H4Q9UPT8 1303 aaKnown RBP6.56□□□□□ -1.36
CHD2-221ENST00000635856 FBXO21O94952 628 aa6.56□□□□□ -1.36
CHD2-221ENST00000635856 RTP1P59025 263 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms