RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 MYPNQ86TC9 1320 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 PP2D1A8MPX8 630 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 LYPLA2O95372 231 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 WHAMMQ8TF30 809 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 BICD1Q96G01 975 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 NLRC4Q9NPP4 1024 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 DBR1Q9UK59 544 aaKnown RBP4.97□□□□□ -1.61
SCN1A-210ENST00000635776 ARAP2Q8WZ64 1704 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 K7ENM7 598 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 PJA2O43164 708 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 ALS2CLQ60I27 953 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 TTBK2Q6IQ55 1244 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 SFR1Q86XK3 245 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 CERS5Q8N5B7 392 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 MIS12Q9H081 205 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 ALAS1P13196 640 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 CUL1Q13616 776 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 PEX26Q7Z412 305 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 TRIM59Q8IWR1 403 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 XXYLT1Q8NBI6 393 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 ACRBPQ8NEB7 543 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 RANBP17Q9H2T7 1088 aaKnown RBP4.97□□□□□ -1.61
SCN1A-210ENST00000635776 FAM114A2Q9NRY5 505 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 LRRC53A6NM62 1247 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 USP8P40818 1118 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 MYL7Q01449 175 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 TRIM65Q6PJ69 517 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 MMGT1Q8N4V1 131 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 FAM129AQ9BZQ8 928 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 HOMER3Q9NSC5 361 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 POTEB3A0JP26 581 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 POTECB2RU33 542 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 IPO5O00410 1097 aaKnown RBP4.97□□□□□ -1.61
SCN1A-210ENST00000635776 MSL1Q68DK7 614 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 MIS18BP1Q6P0N0 1132 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 POTEBQ6S5H4 581 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 CCDC77Q9BR77 488 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 DDX4Q9NQI0 724 aaKnown RBP4.97□□□□□ -1.61
SCN1A-210ENST00000635776 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.97□□□□□ -1.61
SCN1A-210ENST00000635776 SNED1Q8TER0 1413 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 GGPS1O95749 300 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 NFIAQ12857 509 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 PPP2R5CQ13362 524 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 ALKBH5Q6P6C2 394 aaKnown RBP4.97□□□□□ -1.61
SCN1A-210ENST00000635776 NSMFQ6X4W1 530 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 RNF207Q6ZRF8 634 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 BBOF1Q8ND07 529 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 SLC5A5Q92911 643 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 DEFB129Q9H1M3 183 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 HSD3B7Q9H2F3 369 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 CSADQ9Y600 493 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 A0A0A6YYK5 440 aaPredicted RBP4.97□□□□□ -1.61
SCN1A-210ENST00000635776 ANKRD62A6NC57 917 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 BTNL10A8MVZ5 291 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 SLC37A4O43826 429 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 FCER1AP12319 257 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 MTMR1Q13613 665 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 AZI2Q9H6S1 392 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 NHSQ6T4R5 1651 aa4.97□□□□□ -1.61
SCN1A-210ENST00000635776 PGRMC1O00264 195 aaKnown RBP4.96□□□□□ -1.61
SCN1A-210ENST00000635776 BACH1O14867 736 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 CHMP2AO43633 222 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 XKR9Q5GH70 373 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 PADI6Q6TGC4 694 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 FAM76AQ8TAV0 307 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 DUSP9Q99956 384 aaKnown RBP4.96□□□□□ -1.61
SCN1A-210ENST00000635776 CPVLQ9H3G5 476 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 INTS13Q9NVM9 706 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 SNX12Q9UMY4 172 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 CEP83Q9Y592 693 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 NRAPQ86VF7 1730 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 MSH4O15457 936 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 RHOXF2BP0C7M4 288 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 CASP1P29466 404 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 ZNF746Q6NUN9 644 aaPredicted RBP4.96□□□□□ -1.61
SCN1A-210ENST00000635776 RSRC2Q7L4I2 434 aaKnown RBP4.96□□□□□ -1.61
SCN1A-210ENST00000635776 TSC1Q92574 1164 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 NT5C1BQ96P26 610 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 RHOXF2Q9BQY4 288 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 STK33Q9BYT3 514 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 RAB21Q9UL25 225 aa4.96□□□□□ -1.61
SCN1A-210ENST00000635776 DGAT1O75907 488 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 PNMA6AP0CW24 399 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-210ENST00000635776 CALCOCO2Q13137 446 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 CATSPER3Q86XQ3 398 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 TMEM139Q8IV31 216 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 SLC9A9Q8IVB4 645 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 TTC39CQ8N584 583 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 GRK7Q8WTQ7 553 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 AIPL1Q9NZN9 384 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 FAM198AQ9UFP1 575 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 GOLGA6BA6NDN3 693 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 DDTLA6NHG4 134 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-210ENST00000635776 ZSCAN20P17040 1043 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-210ENST00000635776 HLTFQ14527 1009 aaKnown RBP eCLIP4.96□□□□□ -1.626e-7■■■■□ 22.5
SCN1A-210ENST00000635776 LRRC41Q15345 812 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 HOOK3Q86VS8 718 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 SLITRK6Q9H5Y7 841 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 PSD3Q9NYI0 1048 aa4.96□□□□□ -1.62
SCN1A-210ENST00000635776 PCDHA10Q9Y5I2 948 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms