RNA–Protein interactions for RNA: ENST00000635761.1

CLN5-204, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 4

Gene CLN5, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-204ENST00000635761 MBD4O95243 580 aa8.56□□□□□ -1.04
CLN5-204ENST00000635761 CHGBP05060 677 aa8.56□□□□□ -1.04
CLN5-204ENST00000635761 PGK2P07205 417 aa8.56□□□□□ -1.04
CLN5-204ENST00000635761 IFIT2P09913 472 aaKnown RBP8.56□□□□□ -1.04
CLN5-204ENST00000635761 ZNF865P0CJ78 1059 aaPredicted RBP8.56□□□□□ -1.04
CLN5-204ENST00000635761 TAL1P17542 331 aaPredicted RBP8.56□□□□□ -1.04
CLN5-204ENST00000635761 ICA1Q05084 483 aa8.56□□□□□ -1.04
CLN5-204ENST00000635761 C16orf86Q6ZW13 317 aa8.56□□□□□ -1.04
CLN5-204ENST00000635761 REPS2Q8NFH8 660 aa8.56□□□□□ -1.04
CLN5-204ENST00000635761 DNAJC2Q99543 621 aaKnown RBP8.56□□□□□ -1.04
CLN5-204ENST00000635761 HAUS7Q99871 368 aa8.56□□□□□ -1.04
CLN5-204ENST00000635761 KANSL2Q9H9L4 492 aa8.56□□□□□ -1.04
CLN5-204ENST00000635761 NPHS2Q9NP85 383 aa8.56□□□□□ -1.04
CLN5-204ENST00000635761 XPNPEP3Q9NQH7 507 aa8.56□□□□□ -1.04
CLN5-204ENST00000635761 PRDM5Q9NQX1 630 aaPredicted RBP8.56□□□□□ -1.04
CLN5-204ENST00000635761 ZBTB40Q9NUA8 1239 aa8.56□□□□□ -1.04
CLN5-204ENST00000635761 ZNF214Q9UL59 606 aaPredicted RBP8.56□□□□□ -1.04
CLN5-204ENST00000635761 KAT6AQ92794 2004 aa8.56□□□□□ -1.04
CLN5-204ENST00000635761 TET1Q8NFU7 2136 aa8.56□□□□□ -1.04
CLN5-204ENST00000635761 ZBED9Q6R2W3 1325 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 TANC1Q9C0D5 1861 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 DNAJC25-GNG10A0A024R161 153 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 PNMA6FA0A0J9YX94 578 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 RAB11FIP3O75154 756 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 PGK1P00558 417 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 RARBP10826 455 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 STAT3P40763 770 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 EPHB4P54760 987 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 HNRNPUQ00839 825 aaKnown RBP eCLIP8.55□□□□□ -1.04
CLN5-204ENST00000635761 FAAP100Q0VG06 881 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 KCTD2Q14681 263 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 UBE3CQ15386 1083 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 ENOX2Q16206 610 aaKnown RBP8.55□□□□□ -1.04
CLN5-204ENST00000635761 PLA2G4EQ3MJ16 856 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 KIAA0319Q5VV43 1072 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 FAM117BQ6P1L5 589 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 CTR9Q6PD62 1173 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 MAMDC4Q6UXC1 1216 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 ADAMTSL4Q6UY14 1074 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 ANKRD33Q7Z3H0 272 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 RNF180Q86T96 592 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 BSNDQ8WZ55 320 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 MMP19Q99542 508 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.55□□□□□ -1.04
CLN5-204ENST00000635761 BOLA2Q9H3K6 86 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 LIN7BQ9HAP6 207 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 PPP1R9AQ9ULJ8 1098 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 ROBO3Q96MS0 1386 aa8.55□□□□□ -1.04
CLN5-204ENST00000635761 LOXHD1Q8IVV2 1947 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 NLRC5Q86WI3 1866 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 A0A1W2PQ45 241 aaPredicted RBP8.54□□□□□ -1.04
CLN5-204ENST00000635761 A0A1W2PQY0 241 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 LINC01387J3KSC0 135 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 ADAMTS4O75173 837 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 DEAF1O75398 565 aaPredicted RBP8.54□□□□□ -1.04
CLN5-204ENST00000635761 SNAI1O95863 264 aaPredicted RBP8.54□□□□□ -1.04
CLN5-204ENST00000635761 CLTBP09497 229 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 EPHA1P21709 976 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 ACLYP53396 1101 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 SETDB1Q15047 1291 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 GRIK4Q16099 956 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 CCSAPQ6IQ19 270 aaPredicted RBP8.54□□□□□ -1.04
CLN5-204ENST00000635761 CCNJLQ8IV13 435 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 MSL3Q8N5Y2 521 aaKnown RBP8.54□□□□□ -1.04
CLN5-204ENST00000635761 KLHDC9Q8NEP7 349 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 MAFAQ8NHW3 353 aaPredicted RBP8.54□□□□□ -1.04
CLN5-204ENST00000635761 ASAP3Q8TDY4 903 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 MYLIPQ8WY64 445 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 TOX2Q96NM4 488 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 PUS7LQ9H0K6 701 aaKnown RBP8.54□□□□□ -1.04
CLN5-204ENST00000635761 SH2B1Q9NRF2 756 aaPredicted RBP8.54□□□□□ -1.04
CLN5-204ENST00000635761 SOX13Q9UN79 622 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 RIPK3Q9Y572 518 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 SLC4A4Q9Y6R1 1079 aa8.54□□□□□ -1.04
CLN5-204ENST00000635761 SCN10AQ9Y5Y9 1956 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 DOCK5Q9H7D0 1870 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 LAMA4Q16363 1823 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 F5H6K3 240 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 H3BRJ5 948 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 ATP2A1O14983 1001 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 HMMRO75330 724 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 AKR1A1P14550 325 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 RAG1P15918 1043 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 COPB2P35606 906 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 MAPK8P45983 427 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 CDK7P50613 346 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 KLRC3Q07444 240 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 SBK1Q52WX2 424 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 FAM83BQ5T0W9 1011 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 AMOTL1Q8IY63 956 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 PRPF38AQ8NAV1 312 aaKnown RBP8.53□□□□□ -1.04
CLN5-204ENST00000635761 MKL1Q969V6 931 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 STRBPQ96SI9 672 aaKnown RBP8.53□□□□□ -1.04
CLN5-204ENST00000635761 TMEM39AQ9NV64 488 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 SYNGAP1Q96PV0 1343 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 SYNRGQ9UMZ2 1314 aa8.53□□□□□ -1.04
CLN5-204ENST00000635761 TMEM265A0A087WTH1 108 aa8.52□□□□□ -1.05
CLN5-204ENST00000635761 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.52□□□□□ -1.05
CLN5-204ENST00000635761 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.52□□□□□ -1.05
CLN5-204ENST00000635761 GSG1L2A8MUP6 293 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms