RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ZNF143P52747 638 aaPredicted RBP1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 GFRA1P56159 465 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 RACK1P63244 317 aaKnown RBP1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 FANCCQ00597 558 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 NFYCQ13952 458 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 COL9A2Q14055 689 aaPredicted RBP1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 NCAPHQ15003 741 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 LDLRAD1Q5T700 205 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 Q6ZRM9 215 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 USP30Q70CQ3 517 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 USP53Q70EK8 1073 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 OTOP3Q7RTS5 596 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 ADGRE4PQ86SQ3 457 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 ADGRG3Q86Y34 549 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 RTKN2Q8IZC4 609 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 SHCBP1Q8NEM2 672 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 UHMK1Q8TAS1 419 aaKnown RBP1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 MICAL1Q8TDZ2 1067 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 ANAPC16Q96DE5 110 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 SHDQ96IW2 340 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 PHF20Q9BVI0 1012 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 AGO3Q9H9G7 860 aaKnown RBP1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 ARHGAP28Q9P2N2 729 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 DSEQ9UL01 958 aa1.84□□□□□ -2.11
SMARCB1-209ENST00000635578 A0A1W2PRX2 142 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 ZAR1LA6NP61 321 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 B2RBV5 119 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 SLC26A4O43511 780 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 RHOBTB3O94955 611 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 PEX11BO96011 259 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 ERCC3P19447 782 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 GRK2P25098 689 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 GRK3P35626 688 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 STAT3P40763 770 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 NASPP49321 788 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 CASP7P55210 303 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 IL13RA1P78552 427 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 SPIRE1Q08AE8 756 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 DBPQ10586 325 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 TOB2Q14106 344 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 TESK1Q15569 626 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 ZNF362Q5T0B9 420 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 SYCE2Q6PIF2 218 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 C6orf15Q6UXA7 325 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 DPP8Q6V1X1 898 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 KCTD1Q719H9 257 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 MRGPREQ86SM8 312 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 HAS1Q92839 578 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 GPRASP2Q96D09 838 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 PGBD4Q96DM1 585 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 CCDC140Q96MF4 163 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 BBC3Q96PG8 261 aaPredicted RBP1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 MLST8Q9BVC4 326 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 ZDHHC5Q9C0B5 715 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 OR10A2Q9H208 303 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 NELFAQ9H3P2 528 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 PODXL2Q9NZ53 605 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 DDX41Q9UJV9 622 aaKnown RBP1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 SH3BP1Q9Y3L3 701 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 CCDC9Q9Y3X0 531 aaKnown RBP1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 NUB1Q9Y5A7 615 aa1.83□□□□□ -2.12
SMARCB1-209ENST00000635578 KIAA0355O15063 1070 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 CDK4P11802 303 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 CD38P28907 300 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 MC4RP32245 332 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 PTGS2P35354 604 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 GRIA2P42262 883 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 MAN2A2P49641 1150 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 STAT5BP51692 787 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 RIN1Q13671 783 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 SAFB2Q14151 953 aaKnown RBP eCLIP1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 ACAP1Q15027 740 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 COLEC12Q5KU26 742 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 SLC35F1Q5T1Q4 408 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 STRIP1Q5VSL9 837 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 PAPD7Q5XG87 772 aaKnown RBP1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 BTBD8Q5XKL5 378 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 LARP1BQ659C4 914 aaKnown RBP1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 PRIMA1Q86XR5 153 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 ANKRD35Q8N283 1001 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 PROKR1Q8TCW9 393 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 SLC25A43Q8WUT9 341 aaPredicted RBP1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 C1orf159Q96HA4 380 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 BACH2Q9BYV9 841 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 GPR27Q9NS67 375 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 RIC8BQ9NVN3 520 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 PACSIN3Q9UKS6 424 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 NPFFR2Q9Y5X5 522 aa1.82□□□□□ -2.12
SMARCB1-209ENST00000635578 A0A0A6YYK5 440 aaPredicted RBP1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 SUSD5O60279 629 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 PTGS1P23219 599 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 EPHA5P54756 1037 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 CD83Q01151 205 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 HGFACQ04756 655 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 EIF4HQ15056 248 aaKnown RBP1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 PTPAQ15257 358 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 ELAVL1Q15717 326 aaKnown RBP1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 HECTD2Q5U5R9 776 aa1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 SP5Q6BEB4 398 aaPredicted RBP1.81□□□□□ -2.12
SMARCB1-209ENST00000635578 KCNV1Q6PIU1 500 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms