RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 BORAQ6PGQ7 559 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 OVCH1Q7RTY7 1134 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 STRA8Q7Z7C7 330 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 MTDHQ86UE4 582 aaKnown RBP3.7□□□□□ -1.82
PSPC1-208ENST00000635562 FERMT3Q86UX7 667 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 KIF18BQ86Y91 864 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 RIOX2Q8IUF8 465 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 AHI1Q8N157 1196 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 LZTR1Q8N653 840 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 ZNF622Q969S3 477 aaKnown RBP eCLIP3.7□□□□□ -1.827e-11■■■■□ 24.2
PSPC1-208ENST00000635562 C8orf48Q96LL4 319 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 IPPKQ9H8X2 491 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 SRRDQ9UH36 339 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 NUB1Q9Y5A7 615 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 RPGRIP1LQ68CZ1 1315 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 FAM47E-STBD1D6RA91 191 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 CBX4O00257 560 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 TRAF5O00463 557 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 CLGNO14967 610 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 MYO1BO43795 1136 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 GLRX3O76003 335 aaKnown RBP3.69□□□□□ -1.82
PSPC1-208ENST00000635562 PLATP00750 562 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 CYP2C8P10632 490 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 FPR2P25090 351 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 PMLP29590 882 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 LACTBP83111 547 aaPredicted RBP3.69□□□□□ -1.82
PSPC1-208ENST00000635562 ZXDAP98168 799 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 POU5F1Q01860 360 aaKnown RBP3.69□□□□□ -1.82
PSPC1-208ENST00000635562 UBE4AQ14139 1066 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 DHCR24Q15392 516 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 FAM26FQ5R3K3 315 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 CREB3L3Q68CJ9 461 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 CASC1Q6TDU7 716 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 C16orf59Q7L2K0 433 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 OTOP1Q7RTM1 612 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 ZNF761Q86XN6 746 aaPredicted RBP3.69□□□□□ -1.82
PSPC1-208ENST00000635562 LINC00482Q8N8I6 264 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 IGSF22Q8N9C0 903 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.69□□□□□ -1.82
PSPC1-208ENST00000635562 IL17RAQ96F46 866 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 TSPAN18Q96SJ8 248 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 ALG1Q9BT22 464 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 MAP3K20Q9NYL2 800 aaKnown RBP3.69□□□□□ -1.82
PSPC1-208ENST00000635562 GULP1Q9UBP9 304 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 CBLCQ9ULV8 474 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 SCINQ9Y6U3 715 aa3.69□□□□□ -1.82
PSPC1-208ENST00000635562 A0A1B0GTL3 188 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 TCRBV5S4A2TA0A5A2 114 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 KPNA6O60684 536 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 FGAP02671 866 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 AMY2AP04746 511 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 PYGMP11217 842 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 BPIP17213 487 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 AMY2BP19961 511 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 TACR1P25103 407 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 MAN1A1P33908 653 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 FLT3P36888 993 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 CDKN1CP49918 316 aaPredicted RBP3.68□□□□□ -1.82
PSPC1-208ENST00000635562 DSG1Q02413 1049 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 SURF1Q15526 300 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 CFAP100Q494V2 611 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 TMEM177Q53S58 311 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 EMC4Q5J8M3 183 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 PIK3R6Q5UE93 754 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 ICE2Q659A1 982 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 CCSAPQ6IQ19 270 aaPredicted RBP3.68□□□□□ -1.82
PSPC1-208ENST00000635562 CEP68Q76N32 757 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 OTOP3Q7RTS5 596 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 DDX42Q86XP3 938 aaKnown RBP eCLIP3.68□□□□□ -1.82
PSPC1-208ENST00000635562 DCP2Q8IU60 420 aaKnown RBP3.68□□□□□ -1.82
PSPC1-208ENST00000635562 ZC3H7AQ8IWR0 971 aaKnown RBP3.68□□□□□ -1.82
PSPC1-208ENST00000635562 ADGRG2Q8IZP9 1017 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 LGI4Q8N135 537 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 UBR7Q8N806 425 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 SMARCC2Q8TAQ2 1214 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 FBXW5Q969U6 566 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 SLC39A13Q96H72 371 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 TMEM169Q96HH4 297 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 RBM15Q96T37 977 aaKnown RBP eCLIP3.68□□□□□ -1.82
PSPC1-208ENST00000635562 PCGF6Q9BYE7 350 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 INO80BQ9C086 356 aaPredicted RBP3.68□□□□□ -1.82
PSPC1-208ENST00000635562 PDGFDQ9GZP0 370 aaPredicted RBP3.68□□□□□ -1.82
PSPC1-208ENST00000635562 NGRNQ9NPE2 291 aaKnown RBP3.68□□□□□ -1.82
PSPC1-208ENST00000635562 TYW1Q9NV66 732 aaKnown RBP3.68□□□□□ -1.82
PSPC1-208ENST00000635562 CLDND1Q9NY35 253 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 MARCH2Q9P0N8 246 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 SAMD15Q9P1V8 674 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 B4GALT6Q9UBX8 382 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 TCEAL9Q9UHQ7 104 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 ATP8A1Q9Y2Q0 1164 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 COQ6Q9Y2Z9 468 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 RWDD3Q9Y3V2 267 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 HCFC2Q9Y5Z7 792 aa3.68□□□□□ -1.82
PSPC1-208ENST00000635562 CCDC66A2RUB6 948 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 C22orf46C9J442 243 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 ZNF561-AS1K7EIQ3 104 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 M0R2C6 588 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 F2P00734 622 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 FUCA1P04066 466 aa3.67□□□□□ -1.82
PSPC1-208ENST00000635562 PDGFRBP09619 1106 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms