RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 SEMA3FQ13275 785 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 CTTNQ14247 550 aaKnown RBP11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 GNPTABQ3T906 1256 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 KMT5BQ4FZB7 885 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 MIER3Q7Z3K6 550 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 AOPEPQ8N6M6 819 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 MLKLQ8NB16 471 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 ANP32BQ92688 251 aaKnown RBP11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 FGD4Q96M96 766 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 HSD17B14Q9BPX1 270 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 LRRC27Q9C0I9 530 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 TUFT1Q9NNX1 390 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 DACH1Q9UI36 760 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 TSR3Q9UJK0 312 aaKnown RBP11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 ABT1Q9ULW3 272 aaKnown RBP11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 DNAJC25-GNG10A0A024R161 153 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 FAM155AB1AL88 458 aaPredicted RBP11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 B4DLN1 442 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 SPATA31C2B4DYI2 1134 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 SPTLC1O15269 473 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 EIF3JO75822 258 aaKnown RBP11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 SSBP05455 408 aaKnown RBP eCLIP11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 EDNRBP24530 442 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 USP46P62068 366 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 PSMC6P62333 389 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 KCNB1Q14721 858 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 FAM110CQ1W6H9 321 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 ZNF658Q5TYW1 1059 aaPredicted RBP11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 SEPT14Q6ZU15 432 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 DYMQ7RTS9 669 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 TPH2Q8IWU9 490 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 SMYD4Q8IYR2 804 aaPredicted RBP11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 BANK1Q8NDB2 785 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 CCDC47Q96A33 483 aaKnown RBP11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 CDHR1Q96JP9 859 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 DNM3Q9UQ16 869 aa11.08□□□□□ -0.64
SOX2-OT-244ENST00000627738 TMEM88BA6NKF7 163 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 SMTNL1A8MU46 457 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 AP5Z1O43299 807 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 TOMM70O94826 608 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 RHOBTB3O94955 611 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 EYA4O95677 639 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 KCNA2P16389 499 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 MUTP22033 750 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 ICAM3P32942 547 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 SLC12A3P55017 1021 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 KRT76Q01546 638 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 NCAPHQ15003 741 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 TAF1CQ15572 869 aaPredicted RBP11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 GPBP1Q86WP2 473 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 KCTD17Q8N5Z5 321 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 SYT2Q8N9I0 419 aaPredicted RBP11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 NEK9Q8TD19 979 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 MPHOSPH6Q99547 160 aaKnown RBP11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 LXNQ9BS40 222 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 EXOC1Q9NV70 894 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 TCEAL9Q9UHQ7 104 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 CPA4Q9UI42 421 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 GDAQ9Y2T3 454 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 SAMM50Q9Y512 469 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 NFASCO94856 1347 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 ADGRA2Q96PE1 1338 aa11.07□□□□□ -0.64
SOX2-OT-244ENST00000627738 PVALEFA0A1B0GWK0 134 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 IKBKBO14920 756 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 CCNE2O96020 404 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 P4HBP07237 508 aaKnown RBP11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 CYP11B2P19099 503 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 SFNP31947 248 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 JAK3P52333 1124 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 CT47A1Q5JQC4 288 aaPredicted RBP11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 KLHL10Q6JEL2 608 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 ZNF746Q6NUN9 644 aaPredicted RBP11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 CNNM4Q6P4Q7 775 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 UNC13DQ70J99 1090 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 EEPD1Q7L9B9 569 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 GPR142Q7Z601 462 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 PIGOQ8TEQ8 1089 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 DNAJC19Q96DA6 116 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 NACC1Q96RE7 527 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 SENP7Q9BQF6 1050 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 BCAS3Q9H6U6 928 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 ZCCHC17Q9NP64 241 aaKnown RBP11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 WRAP73Q9P2S5 460 aaPredicted RBP11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 IVNS1ABPQ9Y6Y0 642 aa11.06□□□□□ -0.64
SOX2-OT-244ENST00000627738 KIAA1217Q5T5P2 1943 aa11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 NPHP3-ACAD11A0A0J9YXS1 232 aa11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 WDR64B1ANS9 1081 aa11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 ZBTB39O15060 712 aa11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 HOXA2O43364 376 aa11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 STRNO43815 780 aa11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 SORBS3O60504 671 aa11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 COBLO75128 1261 aa11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 ADCY5O95622 1261 aa11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 KRT18P05783 430 aaKnown RBP11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 IDEP14735 1019 aa11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 ERCC5P28715 1186 aaPredicted RBP11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 ADORA2AP29274 412 aa11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 PRCPP42785 496 aa11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 STX17P56962 302 aa11.05□□□□□ -0.64
SOX2-OT-244ENST00000627738 INHBEP58166 350 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms