RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 INSRRP14616 1297 aa12.19□□□□□ -0.46
TCF4-253ENST00000626466 PTPN5P54829 565 aa12.19□□□□□ -0.46
TCF4-253ENST00000626466 NUCB1Q02818 461 aa12.19□□□□□ -0.46
TCF4-253ENST00000626466 UBE2SQ16763 222 aa12.19□□□□□ -0.46
TCF4-253ENST00000626466 NPAS4Q8IUM7 802 aa12.19□□□□□ -0.46
TCF4-253ENST00000626466 FBXL6Q8N531 539 aa12.19□□□□□ -0.46
TCF4-253ENST00000626466 SMARCC2Q8TAQ2 1214 aa12.19□□□□□ -0.46
TCF4-253ENST00000626466 RPGRIP1Q96KN7 1286 aa12.19□□□□□ -0.46
TCF4-253ENST00000626466 WDFY4Q6ZS81 3184 aa12.19□□□□□ -0.46
TCF4-253ENST00000626466 C5orf42Q9H799 3197 aa12.18□□□□□ -0.46
TCF4-253ENST00000626466 hCG_1642624A0A1W2PR95 340 aa12.18□□□□□ -0.46
TCF4-253ENST00000626466 PIK3CDO00329 1044 aa12.18□□□□□ -0.46
TCF4-253ENST00000626466 GSPT1P15170 499 aaKnown RBP12.18□□□□□ -0.46
TCF4-253ENST00000626466 SP100P23497 879 aaPredicted RBP12.18□□□□□ -0.46
TCF4-253ENST00000626466 WTAPQ15007 396 aa12.18□□□□□ -0.46
TCF4-253ENST00000626466 RSPH3Q86UC2 560 aa12.18□□□□□ -0.46
TCF4-253ENST00000626466 NLRX1Q86UT6 975 aa12.18□□□□□ -0.46
TCF4-253ENST00000626466 CMTR1Q8N1G2 835 aaKnown RBP12.18□□□□□ -0.46
TCF4-253ENST00000626466 SEPT1Q8WYJ6 367 aa12.18□□□□□ -0.46
TCF4-253ENST00000626466 GLG1Q92896 1179 aa12.18□□□□□ -0.46
TCF4-253ENST00000626466 ERAP1Q9NZ08 941 aa12.18□□□□□ -0.46
TCF4-253ENST00000626466 PADI3Q9ULW8 664 aa12.18□□□□□ -0.46
TCF4-253ENST00000626466 TRPV2Q9Y5S1 764 aa12.18□□□□□ -0.46
TCF4-253ENST00000626466 UBIAD1Q9Y5Z9 338 aa12.18□□□□□ -0.46
TCF4-253ENST00000626466 PLXNA4Q9HCM2 1894 aa12.18□□□□□ -0.46
TCF4-253ENST00000626466 IGSF9BQ9UPX0 1349 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 E7EWF7 191 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 SCG2P13521 617 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 ERVFC1P60507 584 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 APOBRQ0VD83 1088 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 XRRA1Q6P2D8 792 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 RAB11FIP4Q86YS3 637 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 SUGP1Q8IWZ8 645 aaKnown RBP12.17□□□□□ -0.46
TCF4-253ENST00000626466 IGDCC4Q8TDY8 1250 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 ATP8B4Q8TF62 1192 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 SUSD6Q92537 303 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 GPRASP2Q96D09 838 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 APOL5Q9BWW9 433 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 PHF7Q9BWX1 381 aaPredicted RBP12.17□□□□□ -0.46
TCF4-253ENST00000626466 SPZ1Q9BXG8 430 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 CDHR5Q9HBB8 845 aa12.17□□□□□ -0.46
TCF4-253ENST00000626466 HIP1O00291 1037 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 GFRA3O60609 400 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 RXRAP19793 462 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 PDE4AP27815 886 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 SIGLEC14Q08ET2 396 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 TRAF1Q13077 416 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 PAK2Q13177 524 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 MTMR1Q13613 665 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 PLCB4Q15147 1175 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 DUSP6Q16828 381 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 NAALADL2Q58DX5 795 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 MB21D2Q8IYB1 491 aaPredicted RBP12.16□□□□□ -0.46
TCF4-253ENST00000626466 ZNF654Q8IZM8 581 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 SRBD1Q8N5C6 995 aaKnown RBP12.16□□□□□ -0.46
TCF4-253ENST00000626466 CYP2W1Q8TAV3 490 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 TMEM40Q8WWA1 233 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 CUL5Q93034 780 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 SMOC2Q9H3U7 446 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 SMARCAD1Q9H4L7 1026 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 TLE6Q9H808 572 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 LY9Q9HBG7 655 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 ERVK-5Q9HDB9 667 aa12.16□□□□□ -0.46
TCF4-253ENST00000626466 FSCN2O14926 492 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 ST18O60284 1047 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 FGFR1P11362 822 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 AVPR2P30518 371 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 TRDNQ13061 729 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 FAM102BQ5T8I3 360 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 SYCE2Q6PIF2 218 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 CATIPQ7Z7H3 387 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 RALYLQ86SE5 291 aaKnown RBP12.15□□□□□ -0.46
TCF4-253ENST00000626466 GIMAP8Q8ND71 665 aaPredicted RBP12.15□□□□□ -0.46
TCF4-253ENST00000626466 PPP2R3CQ969Q6 453 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 RRP36Q96EU6 259 aaKnown RBP12.15□□□□□ -0.46
TCF4-253ENST00000626466 PGBD1Q96JS3 809 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 PPP1R16BQ96T49 567 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 CELF4Q9BZC1 486 aaKnown RBP12.15□□□□□ -0.46
TCF4-253ENST00000626466 S1PR5Q9H228 398 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 JADE2Q9NQC1 790 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 TRPC6Q9Y210 931 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 NOC2LQ9Y3T9 749 aaKnown RBP12.15□□□□□ -0.46
TCF4-253ENST00000626466 PCDHA2Q9Y5H9 948 aa12.15□□□□□ -0.46
TCF4-253ENST00000626466 ERICH2A1L162 156 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 RRN3P2A6NIE6 340 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 TBKBP1A7MCY6 615 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 H0Y858 1186 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 FGF18O76093 207 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 STAG3L1P0CL83 205 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 ARP10275 920 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 PBX3P40426 434 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 SARSP49591 514 aaKnown RBP12.14□□□□□ -0.47
TCF4-253ENST00000626466 NFX1Q12986 1120 aaKnown RBP12.14□□□□□ -0.47
TCF4-253ENST00000626466 KCNC3Q14003 757 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 PTPN21Q16825 1174 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 IER5Q5VY09 327 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 PLPP4Q5VZY2 271 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 LLGL2Q6P1M3 1020 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 COLGALT1Q8NBJ5 622 aa12.14□□□□□ -0.47
TCF4-253ENST00000626466 FEZF2Q8TBJ5 459 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms