RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 HSPA4P34932 840 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 RCAN1P53805 252 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 AK2P54819 239 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 DPYSQ14117 519 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 ARHGEF18Q6ZSZ5 1173 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 SESTD1Q86VW0 696 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 CCDC83Q8IWF9 413 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 CCDC89Q8N998 374 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 TMEM87AQ8NBN3 555 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 GIMAP8Q8ND71 665 aaPredicted RBP9.98□□□□□ -0.81
USB1-216ENST00000624720 BRSK1Q8TDC3 778 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 ABTB1Q969K4 478 aaPredicted RBP9.98□□□□□ -0.81
USB1-216ENST00000624720 SPACA7Q96KW9 195 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 FUCA2Q9BTY2 467 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 SPC25Q9HBM1 224 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 TCEAL9Q9UHQ7 104 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 EXOC7Q9UPT5 735 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 PHLPP2Q6ZVD8 1323 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 CDHR2Q9BYE9 1310 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 ERVV-1B6SEH8 477 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 AKR1B15C9JRZ8 316 aaPredicted RBP9.97□□□□□ -0.81
USB1-216ENST00000624720 NMT2O60551 498 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 ATP6V1G2O95670 118 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 CSF1RP07333 972 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 POTEJP0CG39 1038 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 TRIM28Q13263 835 aaKnown RBP9.97□□□□□ -0.81
USB1-216ENST00000624720 ADAM9Q13443 819 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 E2F2Q14209 437 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 C15orf59Q2T9L4 293 aaPredicted RBP9.97□□□□□ -0.81
USB1-216ENST00000624720 CCDC102BQ68D86 513 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 PLA2G4DQ86XP0 818 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 VPS37DQ86XT2 251 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 PDCD7Q8N8D1 485 aaKnown RBP9.97□□□□□ -0.81
USB1-216ENST00000624720 SCAIQ8N9R8 606 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 CNBD1Q8NA66 436 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 LEO1Q8WVC0 666 aaPredicted RBP9.97□□□□□ -0.81
USB1-216ENST00000624720 KIFAP3Q92845 792 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 PARVBQ9HBI1 364 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 GDPD2Q9HCC8 539 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 TTC7AQ9ULT0 858 aaPredicted RBP9.97□□□□□ -0.81
USB1-216ENST00000624720 LZTS1Q9Y250 596 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 ITGB4P16144 1822 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 GAKO14976 1311 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 LRRC72A6NJI9 287 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 TNFRSF10AO00220 468 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 SEC24DO94855 1032 aaPredicted RBP9.97□□□□□ -0.81
USB1-216ENST00000624720 PDE8BO95263 885 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 ACADSBP45954 432 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 BPIFB3P59826 476 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 ETF1P62495 437 aaKnown RBP9.97□□□□□ -0.81
USB1-216ENST00000624720 GPSM2P81274 684 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 CHRNDQ07001 517 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 CASP8Q14790 479 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 CFAP100Q494V2 611 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 SLC9C2Q5TAH2 1124 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 KCTD16Q68DU8 428 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 OLFM4Q6UX06 510 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 RSRC2Q7L4I2 434 aaKnown RBP9.97□□□□□ -0.81
USB1-216ENST00000624720 HOMER1Q86YM7 354 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 OSBP2Q969R2 916 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 GIMAP5Q96F15 307 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 CCDC42Q96M95 316 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 TRAPPC9Q96Q05 1148 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 FERD3LQ96RJ6 166 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 CEP44Q9C0F1 390 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 PUS7LQ9H0K6 701 aaKnown RBP9.97□□□□□ -0.81
USB1-216ENST00000624720 HAUS2Q9NVX0 235 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 EURLQ9NYK6 297 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 DENND2AQ9ULE3 1009 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 ABCC12Q96J65 1359 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 ARFGEF2Q9Y6D5 1785 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 AFDNP55196 1824 aaKnown RBP9.97□□□□□ -0.81
USB1-216ENST00000624720 CACNA1FO60840 1977 aa9.97□□□□□ -0.81
USB1-216ENST00000624720 SPECC1L-ADORA2AF8WAN1 911 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 FOXN3O00409 490 aaPredicted RBP9.96□□□□□ -0.81
USB1-216ENST00000624720 PORP16435 677 aaPredicted RBP9.96□□□□□ -0.81
USB1-216ENST00000624720 STAT3P40763 770 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 AP2B1P63010 937 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 MAP3K11Q16584 847 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 SGSM1Q2NKQ1 1148 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 PCDHGB3Q9Y5G1 929 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 LOC105371267A0A1B0GV96 52 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 GTPBP10A4D1E9 387 aaKnown RBP9.96□□□□□ -0.81
USB1-216ENST00000624720 ACSL4O60488 711 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 GADD45BO75293 160 aaPredicted RBP9.96□□□□□ -0.81
USB1-216ENST00000624720 PRPF6O94906 941 aaKnown RBP9.96□□□□□ -0.81
USB1-216ENST00000624720 CCDC192P0DO97 292 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 ZSCAN22P10073 491 aaPredicted RBP9.96□□□□□ -0.81
USB1-216ENST00000624720 ZKSCAN1P17029 563 aaPredicted RBP9.96□□□□□ -0.81
USB1-216ENST00000624720 ADCY8P40145 1251 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 GPC3P51654 580 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 DSTNP60981 165 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 B2MP61769 119 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 BASP1P80723 227 aaKnown RBP9.96□□□□□ -0.81
USB1-216ENST00000624720 PPP2R3AQ06190 1150 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 PPFIA1Q13136 1202 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 DUS1LQ6P1R4 473 aaKnown RBP9.96□□□□□ -0.81
USB1-216ENST00000624720 SCUBE1Q8IWY4 988 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 IGSF22Q8N9C0 903 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms