RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 CALCRLQ16602 461 aa15.74■□□□□ 0.11
PCDHGC3-208ENST00000622836 MARCH8Q5T0T0 291 aa15.74■□□□□ 0.11
PCDHGC3-208ENST00000622836 MCTP1Q6DN14 999 aa15.74■□□□□ 0.11
PCDHGC3-208ENST00000622836 SLFN12Q8IYM2 578 aa15.74■□□□□ 0.11
PCDHGC3-208ENST00000622836 RDM1Q8NG50 284 aa15.74■□□□□ 0.11
PCDHGC3-208ENST00000622836 BBXQ8WY36 941 aaPredicted RBP15.74■□□□□ 0.11
PCDHGC3-208ENST00000622836 ZBTB10Q96DT7 871 aa15.74■□□□□ 0.11
PCDHGC3-208ENST00000622836 FAM167AQ96KS9 214 aa15.74■□□□□ 0.11
PCDHGC3-208ENST00000622836 FAM49AQ9H0Q0 323 aaPredicted RBP15.74■□□□□ 0.11
PCDHGC3-208ENST00000622836 CXXC1Q9P0U4 656 aaPredicted RBP15.74■□□□□ 0.11
PCDHGC3-208ENST00000622836 CEP131Q9UPN4 1083 aa15.74■□□□□ 0.11
PCDHGC3-208ENST00000622836 SLC4A7Q9Y6M7 1214 aa15.74■□□□□ 0.11
PCDHGC3-208ENST00000622836 IGSF9BQ9UPX0 1349 aa15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 MBLAC1A4D2B0 266 aaPredicted RBP15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 H3BQV1 296 aa15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 M0QZ92 97 aa15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 NEMFO60524 1076 aa15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 NBNO60934 754 aa15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 SMAD3P84022 425 aaKnown RBP15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 ZNF484Q5JVG2 852 aa15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 NOSTRINQ8IVI9 506 aa15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 DNAJB3Q8WWF6 145 aa15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 KCNMB3Q9NPA1 279 aa15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 NRBP2Q9NSY0 501 aa15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 NOL7Q9UMY1 257 aaKnown RBP15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 COL1A2P08123 1366 aa15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 MYH9P35579 1960 aaKnown RBP15.73■□□□□ 0.11
PCDHGC3-208ENST00000622836 LAMA2P24043 3122 aaKnown RBP15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 OATP04181 439 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 RPLP2P05387 115 aaKnown RBP15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 ATP4AP20648 1035 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 KLRC1P26715 233 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 MCM7P33993 719 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 KCNJ6P48051 423 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 PRKCEQ02156 737 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 UGCGQ16739 394 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 IER5Q5VY09 327 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 NCAPH2Q6IBW4 605 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 CNKSR3Q6P9H4 555 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 TRAF7Q6Q0C0 670 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 MTHFD1LQ6UB35 978 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 HAS1Q92839 578 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 PCDHA2Q9Y5H9 948 aa15.72■□□□□ 0.11
PCDHGC3-208ENST00000622836 BAIAP3O94812 1187 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 CXCL10P02778 98 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 TXKP42681 527 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 PPP2R5CQ13362 524 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 IKBKEQ14164 716 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 MBTPS1Q14703 1052 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 GPNMBQ14956 572 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 ZNF697Q5TEC3 545 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 RASIP1Q5U651 963 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 METTL13Q8N6R0 699 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 BANK1Q8NDB2 785 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 VWCEQ96DN2 955 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 SEPT9Q9UHD8 586 aaPredicted RBP15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 VAV3Q9UKW4 847 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 PCDHA12Q9UN75 941 aa15.71■□□□□ 0.11
PCDHGC3-208ENST00000622836 SMIM35A0A1B0GVV1 85 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 GRXCR1A8MXD5 290 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 KIF28PB7ZC32 967 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 EML1O00423 815 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 WNT7AO00755 349 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 ZNF862O60290 1169 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 DKC1O60832 514 aaKnown RBP eCLIP15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 ATP2A2P16615 1042 aaKnown RBP15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 PSMC5P62195 406 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 MRPS6P82932 125 aaKnown RBP15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 TMEM62Q0P6H9 643 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 ZNF174Q15697 407 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 TTC38Q5R3I4 469 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 LARP1BQ659C4 914 aaKnown RBP15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 FAM109BQ6ICB4 259 aaPredicted RBP15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 GPR153Q6NV75 609 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 B3GNT9Q6UX72 402 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 RPAINQ86UA6 219 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 DEFB123Q8N688 67 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 SEPT8Q92599 483 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 TTC12Q9H892 705 aaPredicted RBP15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 CDY2AQ9Y6F7 541 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 TET1Q8NFU7 2136 aa15.7■□□□□ 0.1
PCDHGC3-208ENST00000622836 ABHD14A-ACY1A0A1B0GW23 586 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 DDX11L8A8MPP1 907 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 EFCAB14O75071 495 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 CHRNA1P02708 482 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 GHRP10912 638 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 DNAJB2P25686 324 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 U2AF2P26368 475 aaKnown RBP eCLIP15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 QARSP47897 775 aaKnown RBP15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 TRAPPC10P48553 1259 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 MTERF2Q49AM1 385 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 XKR3Q5GH77 459 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 FAM26DQ5JW98 314 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 NME8Q8N427 588 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 DBF4BQ8NFT6 615 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 SLC9A7Q96T83 725 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 MSRAQ9UJ68 235 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 GINS2Q9Y248 185 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 TRPV2Q9Y5S1 764 aa15.69■□□□□ 0.1
PCDHGC3-208ENST00000622836 ZBTB42B2RXF5 422 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms