RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TAB2Q9NYJ8 693 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 LUC7L2Q9Y383 392 aaKnown RBP9.95□□□□□ -0.82
HDAC9-229ENST00000622668 NFE2L3Q9Y4A8 694 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 SOX10P56693 466 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 BFSP1Q12934 665 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 ELMOD1Q8N336 334 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 MLKLQ8NB16 471 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 OR6B3Q8NGW1 331 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 BRI3BPQ8WY22 251 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 TADA2AO75478 443 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 RPN1P04843 607 aaKnown RBP9.94□□□□□ -0.82
HDAC9-229ENST00000622668 STAG3L1P0CL83 205 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 PRKCZQ05513 592 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 SCARA5Q6ZMJ2 495 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 CCDC50Q8IVM0 306 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 PGBD4Q96DM1 585 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 TMX1Q9H3N1 280 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 SETD4Q9NVD3 440 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 ZMYND8Q9ULU4 1186 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-229ENST00000622668 PARP4Q9UKK3 1724 aaKnown RBP9.94□□□□□ -0.82
HDAC9-229ENST00000622668 CMA1P23946 247 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 ANXA13P27216 316 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 CYLC1P35663 651 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-229ENST00000622668 NPEPPSP55786 919 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 KLHL40Q2TBA0 621 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 CCDC144BQ3MJ40 725 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 SLFN12LQ6IEE8 588 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 C1orf228Q6PIY5 440 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 TTC30AQ86WT1 665 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 RIOX2Q8IUF8 465 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 SLAIN1Q8ND83 568 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 GPRASP2Q96D09 838 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 PLVAPQ9BX97 442 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 VTA1Q9NP79 307 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 TTLL3Q9Y4R7 772 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 PCDHB7Q9Y5E2 793 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 C2CD2LO14523 706 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 CD58P19256 250 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 OR1G1P47890 313 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 KRT17Q04695 432 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 KIZQ2M2Z5 673 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 SHROOM1Q2M3G4 852 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-229ENST00000622668 SAPCD2Q86UD0 394 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 FAM207AQ9NSI2 230 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-229ENST00000622668 MAD2L2Q9UI95 211 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 SNCAIPQ9Y6H5 919 aa9.94□□□□□ -0.82
HDAC9-229ENST00000622668 A0A1W2PRG0 241 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 ZNF233A6NK53 670 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 PP2D1A8MPX8 630 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 KPNA6O60684 536 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 DGAT1O75907 488 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 ALDH7A1P49419 539 aaKnown RBP9.93□□□□□ -0.82
HDAC9-229ENST00000622668 ALDH5A1P51649 535 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-229ENST00000622668 CLCN3P51790 818 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 CDC42EP1Q00587 391 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 HOOK3Q86VS8 718 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 SMAP1Q8IYB5 467 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-229ENST00000622668 DNERQ8NFT8 737 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 PORCNQ9H237 461 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 CUEDC2Q9H467 287 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 STIM2Q9P246 746 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 STK36Q9NRP7 1315 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 OAZ1P54368 228 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 EXOSC10Q01780 885 aaKnown RBP9.93□□□□□ -0.82
HDAC9-229ENST00000622668 PPP2R3AQ06190 1150 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 CFAP58Q5T655 872 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 CDR2LQ86X02 465 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-229ENST00000622668 THEM5Q8N1Q8 247 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 MTMR14Q8NCE2 650 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 LRRC45Q96CN5 670 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 CHAMP1Q96JM3 812 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 MRPL4Q9BYD3 311 aaKnown RBP9.93□□□□□ -0.82
HDAC9-229ENST00000622668 AAASQ9NRG9 546 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 NKRFO15226 690 aaKnown RBP eCLIP9.93□□□□□ -0.82
HDAC9-229ENST00000622668 STAM2O75886 525 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 INHAP05111 366 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 GHRP10912 638 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 KCNA4P22459 653 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 ABCD1P33897 745 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 PKP1Q13835 747 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 TMEM132BQ14DG7 1078 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 MUM1L1Q5H9M0 696 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 ARL6IP4Q66PJ3 421 aaKnown RBP9.93□□□□□ -0.82
HDAC9-229ENST00000622668 TRIM50Q86XT4 487 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 FAM186BQ8IYM0 893 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 GRAMD1CQ8IYS0 662 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 ALS2CR12Q96Q35 445 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 IFIH1Q9BYX4 1025 aaKnown RBP9.93□□□□□ -0.82
HDAC9-229ENST00000622668 IL25Q9H293 177 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 SLC38A10Q9HBR0 1119 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 PXMP2Q9NR77 195 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 IL17RBQ9NRM6 502 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 STXBP3O00186 592 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 HUS1O60921 280 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 COBLO75128 1261 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 KCNA3P22001 575 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 KLRC1P26715 233 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 LIN9Q5TKA1 542 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 IQSEC1Q6DN90 963 aa9.93□□□□□ -0.82
HDAC9-229ENST00000622668 KRBA2Q6ZNG9 492 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms