RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	AGO3	Q9H9G7	860 aa	Known RBP	5.07	□□□□□ -1.6
LINC00649-219	ENST00000622171	C6orf50	Q9HD87	102 aa		5.07	□□□□□ -1.6
LINC00649-219	ENST00000622171	GABBR1	Q9UBS5	961 aa		5.07	□□□□□ -1.6
LINC00649-219	ENST00000622171	PCDHGC5	Q9Y5F6	944 aa		5.07	□□□□□ -1.6
LINC00649-219	ENST00000622171	DOCK6	Q96HP0	2047 aa		5.07	□□□□□ -1.6
LINC00649-219	ENST00000622171	EMSY	Q7Z589	1322 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	MYH15	Q9Y2K3	1946 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	POTEB3	A0JP26	581 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	LINC01553	A4QN01	128 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	ZBTB42	B2RXF5	422 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	IPO5	O00410	1097 aa	Known RBP	5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	MEIS1	O00470	390 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	DHX15	O43143	795 aa	Known RBP	5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	ZNF862	O60290	1169 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	MGEA5	O60502	916 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	GAS7	O60861	476 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	TGFB3	P10600	412 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	IFNAR1	P17181	557 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	SMARCA1	P28370	1054 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	PBX3	P40426	434 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	STAT5B	P51692	787 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	NEK4	P51957	841 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	MRPS6	P82932	125 aa	Known RBP	5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	PRKCE	Q02156	737 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	CYP4A11	Q02928	519 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	PTPN11	Q06124	597 aa	Predicted RBP	5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	MGAT3	Q09327	533 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	NFX1	Q12986	1120 aa	Known RBP	5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	TRAF1	Q13077	416 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	AP3B2	Q13367	1082 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	DRP2	Q13474	957 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	NBR1	Q14596	966 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	MTERF2	Q49AM1	385 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	LRCH2	Q5VUJ6	765 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	KCNV1	Q6PIU1	500 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	POTEB	Q6S5H4	581 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	POTED	Q86YR6	584 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	TRIM22	Q8IYM9	498 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	BLID	Q8IZY5	108 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	CCDC148	Q8NFR7	591 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	TMEM40	Q8WWA1	233 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	SCLT1	Q96NL6	688 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	SLC9A7	Q96T83	725 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	YME1L1	Q96TA2	773 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	RNF26	Q9BY78	433 aa	Predicted RBP	5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	AGXT2	Q9BYV1	514 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	ZMYND12	Q9H0C1	365 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	SMARCAD1	Q9H4L7	1026 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	ZNF302	Q9NR11	478 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	MAP3K20	Q9NYL2	800 aa	Known RBP	5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	ERAP1	Q9NZ08	941 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	ORC3	Q9UBD5	711 aa	Predicted RBP	5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	SEPT9	Q9UHD8	586 aa	Predicted RBP	5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	RAPGEFL1	Q9UHV5	662 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	PCDHA11	Q9Y5I1	949 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	ANK1	P16157	1881 aa		5.06	□□□□□ -1.6
LINC00649-219	ENST00000622171	PLXNA3	P51805	1871 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	CCDC196	A0A1B0GTZ2	297 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	EML1	O00423	815 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	ZBTB39	O15060	712 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	LPXN	O60711	386 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	PFKFB2	O60825	505 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	STAM2	O75886	525 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	GJB5	O95377	273 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	CD2BP2	O95400	341 aa	Known RBP	5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	DEXI	O95424	95 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	CXCL10	P02778	98 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	AMH	P03971	560 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	FGFR1	P11362	822 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	FDPS	P14324	419 aa	Known RBP	5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	KLRC1	P26715	233 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	HOXC8	P31273	242 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	CTNNB1	P35222	781 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	RFC2	P35250	354 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	NPEPPS	P55786	919 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	ADAM17	P78536	824 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	IKBKE	Q14164	716 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	C8orf34	Q49A92	452 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	PLEKHG4	Q58EX7	1191 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	FBXO47	Q5MNV8	452 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	NCAPH2	Q6IBW4	605 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	GPR153	Q6NV75	609 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	MIS18BP1	Q6P0N0	1132 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	XRRA1	Q6P2D8	792 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	MTHFD1L	Q6UB35	978 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	ABHD15	Q6UXT9	468 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	MIER3	Q7Z3K6	550 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	KSR1	Q8IVT5	923 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	ZNF579	Q8NAF0	562 aa	Known RBP	5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	NSUN7	Q8NE18	718 aa	Known RBP	5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	FBXO22	Q8NEZ5	403 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	CRYGN	Q8WXF5	182 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	SEPT8	Q92599	483 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	GTF3C6	Q969F1	213 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	CDHR1	Q96JP9	859 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	SENP7	Q9BQF6	1050 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	TMX1	Q9H3N1	280 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	SUGCT	Q9HAC7	445 aa		5.05	□□□□□ -1.6
LINC00649-219	ENST00000622171	POLD4	Q9HCU8	107 aa		5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms