RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 SPDYE3A6NKU9 549 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 A6NNZ2 444 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 OPLAHO14841 1288 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 EIF3DO15371 548 aaKnown RBP eCLIP10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 HSF2BPO75031 334 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 NDUFB10O96000 172 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 SLURP2P0DP57 97 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 BMP3P12645 472 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 UCHL3P15374 230 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 ERCC3P19447 782 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 SLC9A1P19634 815 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 CXCR5P32302 372 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 NAP1L1P55209 391 aaKnown RBP10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 NPEPPSP55786 919 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 JAM2P57087 298 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 SKOR1P84550 965 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 SLC7A5Q01650 507 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 SLC20A2Q08357 652 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 PABPC4Q13310 644 aaKnown RBP eCLIP10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 EXOC3L4Q17RC7 722 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 KIAA0753Q2KHM9 967 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 ABCB5Q2M3G0 1257 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 TUBB8Q3ZCM7 444 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 ZNF571Q7Z3V5 609 aaPredicted RBP10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 SRLQ86TD4 932 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 CD302Q8IX05 232 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 FAM133AQ8N9E0 248 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 TSEN2Q8NCE0 465 aaKnown RBP10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 SCFD2Q8WU76 684 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 RIN2Q8WYP3 895 aaPredicted RBP10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 TAF4BQ92750 862 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 BORCS6Q96GS4 357 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 MS4A14Q96JA4 679 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 TRIM34Q9BYJ4 488 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 TMX4Q9H1E5 349 aaPredicted RBP10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 TUFT1Q9NNX1 390 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 OLFML3Q9NRN5 406 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 SERPINA10Q9UK55 444 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 DAAM1Q9Y4D1 1078 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 RBBP6Q7Z6E9 1792 aaKnown RBP10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 ASTN1O14525 1302 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 SCN9AQ15858 1988 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 BRWD3Q6RI45 1802 aa10.54□□□□□ -0.72
IGHV3-54-201ENST00000622166 IGLV3-22A0A075B6J6 115 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 GOLGA6CA6NDK9 693 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 FAM86B1E9PN63 330 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 AKAP3O75969 853 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 KIF4AO95239 1232 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 FTCDO95954 541 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 NR3C1P04150 777 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 FAM86B2P0C5J1 330 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 GOLGA6DP0CG33 693 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 ZBTB48P10074 688 aaPredicted RBP10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 ACTN1P12814 892 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 FERP16591 822 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 MATR3P43243 847 aaKnown RBP eCLIP10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 TNNC1P63316 161 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 PTK2Q05397 1052 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 RPS6KA1Q15418 735 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 SHROOM1Q2M3G4 852 aaPredicted RBP10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 EMC10Q5UCC4 262 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 SLFN11Q7Z7L1 901 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 GPIHBP1Q8IV16 184 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 LRRC57Q8N9N7 239 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 USP38Q8NB14 1042 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 ACTRT1Q8TDG2 376 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 WHAMMQ8TF30 809 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 GDAP1L1Q96MZ0 367 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 EIF2AK1Q9BQI3 630 aaKnown RBP10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 MKNK1Q9BUB5 465 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 PACSIN1Q9BY11 444 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 ZHX3Q9H4I2 956 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 KCNQ5Q9NR82 932 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 GOLGA6AQ9NYA3 693 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 SEL1LQ9UBV2 794 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 ADAMTS1Q9UHI8 967 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 FEZ2Q9UHY8 353 aaPredicted RBP10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 STXBP5LQ9Y2K9 1186 aa10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 RRP15Q9Y3B9 282 aaKnown RBP10.53□□□□□ -0.72
IGHV3-54-201ENST00000622166 LOXHD1Q8IVV2 1947 aa10.52□□□□□ -0.72
IGHV3-54-201ENST00000622166 FAM196BA6NMK8 535 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 MYO1CO00159 1063 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 EML1O00423 815 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 MEIS1O00470 390 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 TGFB1I1O43294 461 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 TBCAO75347 108 aaKnown RBP10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 HEXIM1O94992 359 aaKnown RBP10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 GLI1P08151 1106 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 XRCC5P13010 732 aaKnown RBP10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 IRAK1P51617 712 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 TCP10Q12799 353 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 PPP2R5CQ13362 524 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 RBM26Q5T8P6 1007 aaKnown RBP10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 MEX3CQ5U5Q3 659 aaKnown RBP10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 STYK1Q6J9G0 422 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 RINT1Q6NUQ1 792 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 FOXR1Q6PIV2 292 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 IQCKQ8N0W5 287 aa10.52□□□□□ -0.73
IGHV3-54-201ENST00000622166 RASGEF1CQ8N431 466 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms