RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 RNF14Q9UBS8 474 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 ZMYM2Q9UBW7 1377 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 CCDC66A2RUB6 948 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 RSPH10B2B2RC85 870 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 TBC1D12O60347 775 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 N4BP1O75113 896 aaKnown RBP10.36□□□□□ -0.75
PDPN-212ENST00000621990 SLITRK3O94933 977 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 NR3C1P04150 777 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 VIL1P09327 827 aaKnown RBP10.36□□□□□ -0.75
PDPN-212ENST00000621990 RSPH10BP0C881 870 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 RPL13P26373 211 aaKnown RBP10.36□□□□□ -0.75
PDPN-212ENST00000621990 PON1P27169 355 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 ZNF131P52739 623 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 RSBN1LQ6PCB5 846 aaPredicted RBP10.36□□□□□ -0.75
PDPN-212ENST00000621990 B3GNT9Q6UX72 402 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 C1orf186Q6ZWK4 172 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 SPICE1Q8N0Z3 855 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 AENQ8WTP8 325 aaKnown RBP10.36□□□□□ -0.75
PDPN-212ENST00000621990 TBC1D5Q92609 795 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 ZHX3Q9H4I2 956 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 ZBTB21Q9ULJ3 1066 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 HPCAL4Q9UM19 191 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 NENFQ9UMX5 172 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 BZW2Q9Y6E2 419 aaKnown RBP10.36□□□□□ -0.75
PDPN-212ENST00000621990 UBE4BO95155 1302 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 A0A087X0T9 212 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 TBCAO75347 108 aaKnown RBP10.35□□□□□ -0.75
PDPN-212ENST00000621990 FAM228BP0C875 321 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 XRCC5P13010 732 aaKnown RBP10.35□□□□□ -0.75
PDPN-212ENST00000621990 UCHL3P15374 230 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 TNFRSF8P28908 595 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 PRKCIP41743 596 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 EPS15P42566 896 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 CYP4A11Q02928 519 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 ASIC2Q16515 512 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 FKBP1CQ5VVH2 108 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 ACER1Q8TDN7 264 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 SLC35C1Q96A29 364 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 RGL1Q9NZL6 768 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 KCND2Q9NZV8 630 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 FRMPD4Q14CM0 1322 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 GCOM1H8Y6P7 765 aaPredicted RBP10.35□□□□□ -0.75
PDPN-212ENST00000621990 TGFB1I1O43294 461 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 PPIP5K2O43314 1243 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 PRPF6O94906 941 aaKnown RBP10.35□□□□□ -0.75
PDPN-212ENST00000621990 POLR2MP0CAP2 368 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 MYBL2P10244 700 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 ZNF76P36508 570 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 JAM2P57087 298 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 KLHL30Q0D2K2 578 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 RAPGEF1Q13905 1077 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 SPDYE2Q495Y8 402 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 CCDC70Q6NSX1 233 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 FAM133AQ8N9E0 248 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 DRC1Q96MC2 740 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 FIZ1Q96SL8 496 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 SIX2Q9NPC8 291 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 RNF216Q9NWF9 866 aaPredicted RBP10.35□□□□□ -0.75
PDPN-212ENST00000621990 TMOD2Q9NZR1 351 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 SEL1LQ9UBV2 794 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 ZNF70Q9UC06 446 aaPredicted RBP10.35□□□□□ -0.75
PDPN-212ENST00000621990 COL4A5P29400 1685 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 SYF2O95926 243 aaKnown RBP10.35□□□□□ -0.75
PDPN-212ENST00000621990 SLC9A1P19634 815 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 KLRC1P26715 233 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 PTK2Q05397 1052 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 EXOC3L4Q17RC7 722 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 GLE1Q53GS7 698 aaKnown RBP10.35□□□□□ -0.75
PDPN-212ENST00000621990 MEI1Q5TIA1 1274 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 LRCH2Q5VUJ6 765 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 ANKRD13CQ8N6S4 541 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 CHURC1Q8WUH1 139 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 VCPKMTQ9H867 229 aa10.35□□□□□ -0.75
PDPN-212ENST00000621990 ZNF219Q9P2Y4 722 aaPredicted RBP10.35□□□□□ -0.75
PDPN-212ENST00000621990 GRID2IPA4D2P6 1211 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 CES2O00748 559 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 NCK2O43639 380 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 PALMO75781 387 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 EPB41P11171 864 aaKnown RBP10.34□□□□□ -0.75
PDPN-212ENST00000621990 POLD1P28340 1107 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 PRELPP51888 382 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 SETQ01105 290 aaPredicted RBP10.34□□□□□ -0.75
PDPN-212ENST00000621990 CEP55Q53EZ4 464 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 ZNF772Q68DY9 489 aaPredicted RBP10.34□□□□□ -0.75
PDPN-212ENST00000621990 PSMD1Q99460 953 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 LRRC1Q9BTT6 524 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 MKNK1Q9BUB5 465 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 SELENOOQ9BVL4 669 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 VPS18Q9P253 973 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 ADAMTS1Q9UHI8 967 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 TCP10L2B9ZVM9 353 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 BUB1O43683 1085 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 GCNT3O95395 438 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 ACTN1P12814 892 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 GYS2P54840 703 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 MAP3K10Q02779 954 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 KCNA1Q09470 495 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 KIAA0753Q2KHM9 967 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 CFAP221Q4G0U5 840 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 HSP90B2PQ58FF3 399 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms