RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 RAB34Q9BZG1 259 aa20.85■□□□□ 0.93
CIRBP-245ENST00000621399 FTOQ9C0B1 505 aaKnown RBP eCLIP20.85■□□□□ 0.93
CIRBP-245ENST00000621399 RGL1Q9NZL6 768 aa20.85■□□□□ 0.93
CIRBP-245ENST00000621399 H0YGN5 161 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 TREHO43280 583 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 BRD1O95696 1058 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 RAG1P15918 1043 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 CTTNQ14247 550 aaKnown RBP20.84■□□□□ 0.93
CIRBP-245ENST00000621399 PDIA5Q14554 519 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 IL17AQ16552 155 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 FOXD4L6Q3SYB3 417 aaPredicted RBP20.84■□□□□ 0.93
CIRBP-245ENST00000621399 XKR3Q5GH77 459 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 ZNF484Q5JVG2 852 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 ARL6IP4Q66PJ3 421 aaKnown RBP20.84■□□□□ 0.93
CIRBP-245ENST00000621399 FOXD4L3Q6VB84 417 aaPredicted RBP20.84■□□□□ 0.93
CIRBP-245ENST00000621399 TPH2Q8IWU9 490 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 ERMNQ8TAM6 284 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 CTAGE1Q96RT6 745 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 HSD17B14Q9BPX1 270 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 LXNQ9BS40 222 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 LRWD1Q9UFC0 647 aa20.84■□□□□ 0.93
CIRBP-245ENST00000621399 ALPK3Q96L96 1907 aa20.83■□□□□ 0.93
CIRBP-245ENST00000621399 DDX11L8A8MPP1 907 aa20.83■□□□□ 0.93
CIRBP-245ENST00000621399 SLITRK3O94933 977 aa20.83■□□□□ 0.93
CIRBP-245ENST00000621399 ADAM17P78536 824 aa20.83■□□□□ 0.93
CIRBP-245ENST00000621399 PTK7Q13308 1070 aa20.83■□□□□ 0.93
CIRBP-245ENST00000621399 NEK9Q8TD19 979 aa20.83■□□□□ 0.93
CIRBP-245ENST00000621399 TRAPPC12Q8WVT3 735 aa20.83■□□□□ 0.93
CIRBP-245ENST00000621399 USP28Q96RU2 1077 aa20.83■□□□□ 0.93
CIRBP-245ENST00000621399 PPP1R12CQ9BZL4 782 aa20.83■□□□□ 0.93
CIRBP-245ENST00000621399 HIPK3Q9H422 1215 aa20.83■□□□□ 0.93
CIRBP-245ENST00000621399 ZSWIM4Q9H7M6 989 aa20.83■□□□□ 0.93
CIRBP-245ENST00000621399 TUBE1Q9UJT0 475 aa20.83■□□□□ 0.93
CIRBP-245ENST00000621399 ZDHHC9Q9Y397 364 aa20.83■□□□□ 0.93
CIRBP-245ENST00000621399 VWA3AA6NCI4 1184 aa20.82■□□□□ 0.92
CIRBP-245ENST00000621399 TIMP1P01033 207 aa20.82■□□□□ 0.92
CIRBP-245ENST00000621399 MARCH8Q5T0T0 291 aa20.82■□□□□ 0.92
CIRBP-245ENST00000621399 SERINC5Q86VE9 423 aa20.82■□□□□ 0.92
CIRBP-245ENST00000621399 CCDC155Q8N6L0 562 aa20.82■□□□□ 0.92
CIRBP-245ENST00000621399 IGSF22Q8N9C0 903 aa20.82■□□□□ 0.92
CIRBP-245ENST00000621399 NOC4LQ9BVI4 516 aaKnown RBP20.82■□□□□ 0.92
CIRBP-245ENST00000621399 WRAP73Q9P2S5 460 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-245ENST00000621399 TFIP11Q9UBB9 837 aaKnown RBP20.82■□□□□ 0.92
CIRBP-245ENST00000621399 SEPT9Q9UHD8 586 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-245ENST00000621399 COL1A2P08123 1366 aa20.82■□□□□ 0.92
CIRBP-245ENST00000621399 STBD1O95210 358 aa20.81■□□□□ 0.92
CIRBP-245ENST00000621399 BFSP2Q13515 415 aa20.81■□□□□ 0.92
CIRBP-245ENST00000621399 PTPAQ15257 358 aa20.81■□□□□ 0.92
CIRBP-245ENST00000621399 HAUS3Q68CZ6 603 aa20.81■□□□□ 0.92
CIRBP-245ENST00000621399 C4orf19Q8IY42 314 aa20.81■□□□□ 0.92
CIRBP-245ENST00000621399 RETREG2Q8NC44 543 aa20.81■□□□□ 0.92
CIRBP-245ENST00000621399 DHX38Q92620 1227 aaKnown RBP20.81■□□□□ 0.92
CIRBP-245ENST00000621399 ZBTB10Q96DT7 871 aa20.81■□□□□ 0.92
CIRBP-245ENST00000621399 LBHD1Q9BQE6 289 aaPredicted RBP20.81■□□□□ 0.92
CIRBP-245ENST00000621399 NIFKQ9BYG3 293 aaKnown RBP20.81■□□□□ 0.92
CIRBP-245ENST00000621399 TUFT1Q9NNX1 390 aa20.81■□□□□ 0.92
CIRBP-245ENST00000621399 STK24Q9Y6E0 443 aa20.81■□□□□ 0.92
CIRBP-245ENST00000621399 MBLAC1A4D2B0 266 aaPredicted RBP20.8■□□□□ 0.92
CIRBP-245ENST00000621399 ZBTB42B2RXF5 422 aa20.8■□□□□ 0.92
CIRBP-245ENST00000621399 ITGB8P26012 769 aa20.8■□□□□ 0.92
CIRBP-245ENST00000621399 KLRC1P26715 233 aa20.8■□□□□ 0.92
CIRBP-245ENST00000621399 CYP2C18P33260 490 aa20.8■□□□□ 0.92
CIRBP-245ENST00000621399 MTHFD1LQ6UB35 978 aa20.8■□□□□ 0.92
CIRBP-245ENST00000621399 ANO5Q75V66 913 aa20.8■□□□□ 0.92
CIRBP-245ENST00000621399 CATSPER3Q86XQ3 398 aa20.8■□□□□ 0.92
CIRBP-245ENST00000621399 CAGE1Q8TC20 777 aa20.8■□□□□ 0.92
CIRBP-245ENST00000621399 POLR3CQ9BUI4 534 aaPredicted RBP20.8■□□□□ 0.92
CIRBP-245ENST00000621399 UMODL1Q5DID0 1318 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 TMEM150BA6NC51 233 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 PP2D1A8MPX8 630 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 MED24O75448 989 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 LYPLA2O95372 231 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 SPATA31C1P0DKV0 1188 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 RPA1P27694 616 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 MARCKSP29966 332 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-245ENST00000621399 YWHABP31946 246 aaKnown RBP20.79■□□□□ 0.92
CIRBP-245ENST00000621399 THPOP40225 353 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 CCT6AP40227 531 aaKnown RBP20.79■□□□□ 0.92
CIRBP-245ENST00000621399 NASPP49321 788 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-245ENST00000621399 NUCB2P80303 420 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 SLC39A14Q15043 492 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 STK38Q15208 465 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 MTERF2Q49AM1 385 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 KRT79Q5XKE5 535 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 TAF2Q6P1X5 1199 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 RUFY4Q6ZNE9 571 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 OTUD6AQ7L8S5 288 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 SNX29Q8TEQ0 813 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 BADQ92934 168 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 WNT8BQ93098 351 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 TSHZ2Q9NRE2 1034 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 RBM19Q9Y4C8 960 aaKnown RBP20.79■□□□□ 0.92
CIRBP-245ENST00000621399 PCDHA2Q9Y5H9 948 aa20.79■□□□□ 0.92
CIRBP-245ENST00000621399 PITPNM1O00562 1244 aa20.78■□□□□ 0.92
CIRBP-245ENST00000621399 CDC25AP30304 524 aa20.78■□□□□ 0.92
CIRBP-245ENST00000621399 DDIT3P35638 169 aa20.78■□□□□ 0.92
CIRBP-245ENST00000621399 CCL23P55773 120 aa20.78■□□□□ 0.92
CIRBP-245ENST00000621399 MDM2Q00987 491 aaPredicted RBP20.78■□□□□ 0.92
CIRBP-245ENST00000621399 TRIM71Q2Q1W2 868 aaKnown RBP20.78■□□□□ 0.92
CIRBP-245ENST00000621399 PLA2G4FQ68DD2 849 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms