RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 SETQ01105 290 aaPredicted RBP27.28■■□□□ 1.96
ATXN3-253ENST00000621269 MIS18BP1Q6P0N0 1132 aa27.28■■□□□ 1.96
ATXN3-253ENST00000621269 ABHD15Q6UXT9 468 aa27.28■■□□□ 1.96
ATXN3-253ENST00000621269 UHRF1Q96T88 793 aaPredicted RBP27.28■■□□□ 1.96
ATXN3-253ENST00000621269 ZSWIM6Q9HCJ5 1215 aa27.28■■□□□ 1.96
ATXN3-253ENST00000621269 TBC1D22BQ9NU19 505 aa27.28■■□□□ 1.96
ATXN3-253ENST00000621269 CYP46A1Q9Y6A2 500 aa27.28■■□□□ 1.96
ATXN3-253ENST00000621269 ADAMTS3O15072 1205 aa27.27■■□□□ 1.96
ATXN3-253ENST00000621269 EPC2Q52LR7 807 aa27.27■■□□□ 1.96
ATXN3-253ENST00000621269 IL17RAQ96F46 866 aa27.27■■□□□ 1.96
ATXN3-253ENST00000621269 UIMC1Q96RL1 719 aa27.27■■□□□ 1.96
ATXN3-253ENST00000621269 NCOA5Q9HCD5 579 aaKnown RBP27.27■■□□□ 1.96
ATXN3-253ENST00000621269 ZNF302Q9NR11 478 aa27.27■■□□□ 1.96
ATXN3-253ENST00000621269 TCEAL9Q9UHQ7 104 aa27.27■■□□□ 1.96
ATXN3-253ENST00000621269 TRPV2Q9Y5S1 764 aa27.27■■□□□ 1.96
ATXN3-253ENST00000621269 ENPP3O14638 875 aa27.26■■□□□ 1.95
ATXN3-253ENST00000621269 DHX15O43143 795 aaKnown RBP27.26■■□□□ 1.95
ATXN3-253ENST00000621269 BMP1P13497 986 aa27.26■■□□□ 1.95
ATXN3-253ENST00000621269 TMEM62Q0P6H9 643 aa27.26■■□□□ 1.95
ATXN3-253ENST00000621269 MTHFD1LQ6UB35 978 aa27.26■■□□□ 1.95
ATXN3-253ENST00000621269 TRIM22Q8IYM9 498 aa27.26■■□□□ 1.95
ATXN3-253ENST00000621269 NME8Q8N427 588 aa27.26■■□□□ 1.95
ATXN3-253ENST00000621269 SQORQ9Y6N5 450 aa27.26■■□□□ 1.95
ATXN3-253ENST00000621269 SMIM35A0A1B0GVV1 85 aa27.25■■□□□ 1.95
ATXN3-253ENST00000621269 HBP1O60381 514 aa27.25■■□□□ 1.95
ATXN3-253ENST00000621269 KCNQ1P51787 676 aa27.25■■□□□ 1.95
ATXN3-253ENST00000621269 SWSAP1Q6NVH7 229 aa27.25■■□□□ 1.95
ATXN3-253ENST00000621269 PDXDC2PQ6P474 469 aa27.25■■□□□ 1.95
ATXN3-253ENST00000621269 RASGRP4Q8TDF6 673 aa27.25■■□□□ 1.95
ATXN3-253ENST00000621269 ATP8B4Q8TF62 1192 aa27.25■■□□□ 1.95
ATXN3-253ENST00000621269 VPS54Q9P1Q0 977 aa27.25■■□□□ 1.95
ATXN3-253ENST00000621269 SIP14410 1827 aa27.25■■□□□ 1.95
ATXN3-253ENST00000621269 KLRC1P26715 233 aa27.24■■□□□ 1.95
ATXN3-253ENST00000621269 CD52P31358 61 aa27.24■■□□□ 1.95
ATXN3-253ENST00000621269 TOB2Q14106 344 aaPredicted RBP27.24■■□□□ 1.95
ATXN3-253ENST00000621269 PTPROQ16827 1216 aa27.24■■□□□ 1.95
ATXN3-253ENST00000621269 PRR16Q569H4 304 aa27.24■■□□□ 1.95
ATXN3-253ENST00000621269 CCDC60Q8IWA6 550 aaPredicted RBP27.24■■□□□ 1.95
ATXN3-253ENST00000621269 TMEM192Q8IY95 271 aa27.24■■□□□ 1.95
ATXN3-253ENST00000621269 CKAP2LQ8IYA6 745 aa27.24■■□□□ 1.95
ATXN3-253ENST00000621269 FIBCD1Q8N539 461 aa27.24■■□□□ 1.95
ATXN3-253ENST00000621269 CELF4Q9BZC1 486 aaKnown RBP27.24■■□□□ 1.95
ATXN3-253ENST00000621269 AGO3Q9H9G7 860 aaKnown RBP27.24■■□□□ 1.95
ATXN3-253ENST00000621269 SH3GLB2Q9NR46 395 aa27.24■■□□□ 1.95
ATXN3-253ENST00000621269 XIRP2A4UGR9 3374 aa27.23■■□□□ 1.95
ATXN3-253ENST00000621269 PRRC2BQ5JSZ5 2229 aaKnown RBP27.23■■□□□ 1.95
ATXN3-253ENST00000621269 CPLX1O14810 134 aa27.23■■□□□ 1.95
ATXN3-253ENST00000621269 NLRP5P59047 1200 aa27.23■■□□□ 1.95
ATXN3-253ENST00000621269 KRT76Q01546 638 aa27.23■■□□□ 1.95
ATXN3-253ENST00000621269 SSRP1Q08945 709 aaKnown RBP27.23■■□□□ 1.95
ATXN3-253ENST00000621269 ZNF484Q5JVG2 852 aa27.23■■□□□ 1.95
ATXN3-253ENST00000621269 ZNF746Q6NUN9 644 aaPredicted RBP27.23■■□□□ 1.95
ATXN3-253ENST00000621269 SMAP1Q8IYB5 467 aaPredicted RBP27.23■■□□□ 1.95
ATXN3-253ENST00000621269 FTHL17Q9BXU8 183 aa27.23■■□□□ 1.95
ATXN3-253ENST00000621269 TM6SF1Q9BZW5 370 aa27.23■■□□□ 1.95
ATXN3-253ENST00000621269 COL1A2P08123 1366 aa27.22■■□□□ 1.95
ATXN3-253ENST00000621269 H3BNC9 293 aa27.22■■□□□ 1.95
ATXN3-253ENST00000621269 PSAPP07602 524 aa27.22■■□□□ 1.95
ATXN3-253ENST00000621269 CIITAP33076 1130 aa27.22■■□□□ 1.95
ATXN3-253ENST00000621269 GPM6BQ13491 265 aa27.22■■□□□ 1.95
ATXN3-253ENST00000621269 MRPL38Q96DV4 380 aaKnown RBP27.22■■□□□ 1.95
ATXN3-253ENST00000621269 ZNF274Q96GC6 653 aaPredicted RBP27.22■■□□□ 1.95
ATXN3-253ENST00000621269 COL4A6Q14031 1691 aa27.21■■□□□ 1.95
ATXN3-253ENST00000621269 PAK2Q13177 524 aa27.21■■□□□ 1.95
ATXN3-253ENST00000621269 UPF3BQ9BZI7 483 aaKnown RBP27.21■■□□□ 1.95
ATXN3-253ENST00000621269 PADI3Q9ULW8 664 aa27.21■■□□□ 1.95
ATXN3-253ENST00000621269 SAMM50Q9Y512 469 aa27.21■■□□□ 1.95
ATXN3-253ENST00000621269 PCDHA10Q9Y5I2 948 aa27.21■■□□□ 1.95
ATXN3-253ENST00000621269 IGSF9BQ9UPX0 1349 aa27.2■■□□□ 1.95
ATXN3-253ENST00000621269 CPLX2Q6PUV4 134 aaKnown RBP27.2■■□□□ 1.94
ATXN3-253ENST00000621269 BBXQ8WY36 941 aaPredicted RBP27.2■■□□□ 1.94
ATXN3-253ENST00000621269 RWDD3Q9Y3V2 267 aa27.2■■□□□ 1.94
ATXN3-253ENST00000621269 MAFBQ9Y5Q3 323 aaPredicted RBP27.2■■□□□ 1.94
ATXN3-253ENST00000621269 ADGRA3Q8IWK6 1321 aa27.19■■□□□ 1.94
ATXN3-253ENST00000621269 KDM3AQ9Y4C1 1321 aa27.19■■□□□ 1.94
ATXN3-253ENST00000621269 CTNNB1P35222 781 aa27.19■■□□□ 1.94
ATXN3-253ENST00000621269 USP11P51784 963 aa27.19■■□□□ 1.94
ATXN3-253ENST00000621269 NECAB3Q96P71 396 aaPredicted RBP27.19■■□□□ 1.94
ATXN3-253ENST00000621269 LARP6Q9BRS8 491 aaKnown RBP27.19■■□□□ 1.94
ATXN3-253ENST00000621269 PDRG1Q9NUG6 133 aa27.19■■□□□ 1.94
ATXN3-253ENST00000621269 GINS2Q9Y248 185 aa27.19■■□□□ 1.94
ATXN3-253ENST00000621269 DEXIO95424 95 aa27.18■■□□□ 1.94
ATXN3-253ENST00000621269 ATP4AP20648 1035 aa27.18■■□□□ 1.94
ATXN3-253ENST00000621269 STK3Q13188 491 aa27.18■■□□□ 1.94
ATXN3-253ENST00000621269 BTG3Q14201 252 aaPredicted RBP27.18■■□□□ 1.94
ATXN3-253ENST00000621269 TRMT1LQ7Z2T5 733 aaKnown RBP27.18■■□□□ 1.94
ATXN3-253ENST00000621269 KIAA0319LQ8IZA0 1049 aa27.18■■□□□ 1.94
ATXN3-253ENST00000621269 LINC01599Q8WXQ3 324 aa27.18■■□□□ 1.94
ATXN3-253ENST00000621269 C22orf23Q9BZE7 217 aa27.18■■□□□ 1.94
ATXN3-253ENST00000621269 GABBR1Q9UBS5 961 aa27.18■■□□□ 1.94
ATXN3-253ENST00000621269 PCDHA4Q9UN74 947 aa27.18■■□□□ 1.94
ATXN3-253ENST00000621269 DGKIO75912 1065 aa27.17■■□□□ 1.94
ATXN3-253ENST00000621269 TIGD5Q53EQ6 642 aa27.17■■□□□ 1.94
ATXN3-253ENST00000621269 RTN4RL1Q86UN2 441 aaPredicted RBP27.17■■□□□ 1.94
ATXN3-253ENST00000621269 LENG9Q96B70 501 aa27.17■■□□□ 1.94
ATXN3-253ENST00000621269 ZNF689Q96CS4 500 aaPredicted RBP27.17■■□□□ 1.94
ATXN3-253ENST00000621269 CEP131Q9UPN4 1083 aa27.17■■□□□ 1.94
ATXN3-253ENST00000621269 WDR64B1ANS9 1081 aa27.16■■□□□ 1.94
ATXN3-253ENST00000621269 ZBTB42B2RXF5 422 aa27.16■■□□□ 1.94
ATXN3-253ENST00000621269 RB1P06400 928 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms