RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 UNC13DQ70J99 1090 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 SPATA4Q8NEY3 305 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 RAD54LQ92698 747 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 LZTS2Q9BRK4 669 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 TTYH3Q9C0H2 523 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 PKD2L1Q9P0L9 805 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 GPR75-ASB3A0A0A6YYF3 556 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 SETSIPP0DME0 302 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 PRPHP41219 470 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 COASYQ13057 564 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 ADAM9Q13443 819 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 MAN2A1Q16706 1144 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 ADAT2Q7Z6V5 191 aaKnown RBP11.69□□□□□ -0.54
CDH1-214ENST00000621016 HNRNPLLQ8WVV9 542 aaKnown RBP11.69□□□□□ -0.54
CDH1-214ENST00000621016 OSBPL9Q96SU4 736 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 MMADHCQ9H3L0 296 aaPredicted RBP11.69□□□□□ -0.54
CDH1-214ENST00000621016 RBM12Q9NTZ6 932 aaKnown RBP11.69□□□□□ -0.54
CDH1-214ENST00000621016 SEPT11Q9NVA2 429 aaKnown RBP11.69□□□□□ -0.54
CDH1-214ENST00000621016 HYOU1Q9Y4L1 999 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 MYH10P35580 1976 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 SPDYE3A6NKU9 549 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 UBAP1LF5GYI3 381 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 ZNF189O75820 626 aaPredicted RBP11.68□□□□□ -0.54
CDH1-214ENST00000621016 PSMC6P62333 389 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 ZYXQ15942 572 aaKnown RBP11.68□□□□□ -0.54
CDH1-214ENST00000621016 CENPPQ6IPU0 288 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 PNMA8AQ86V59 439 aaPredicted RBP11.68□□□□□ -0.54
CDH1-214ENST00000621016 NCAPG2Q86XI2 1143 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 RDH13Q8NBN7 331 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 TRIM58Q8NG06 486 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 SPAG5Q96R06 1193 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 HPCAL4Q9UM19 191 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 SNX12Q9UMY4 172 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 PLAGL2Q9UPG8 496 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 PCDHB13Q9Y5F0 798 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 PRPF6O94906 941 aaKnown RBP11.68□□□□□ -0.54
CDH1-214ENST00000621016 PPP4CP60510 307 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 GUCY2DQ02846 1103 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 HLTFQ14527 1009 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDH1-214ENST00000621016 FAM83BQ5T0W9 1011 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 WLSQ5T9L3 541 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 TRIM68Q6AZZ1 485 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 C8orf74Q6P047 294 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 CYB5D1Q6P9G0 228 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 CCDC84Q86UT8 332 aaPredicted RBP11.68□□□□□ -0.54
CDH1-214ENST00000621016 CREG2Q8IUH2 290 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 KSR1Q8IVT5 923 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 CYP2W1Q8TAV3 490 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 CUL5Q93034 780 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 GOLGA6L7A0A1B0GV03 622 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 PALMO75781 387 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 RTN3O95197 1032 aaPredicted RBP11.68□□□□□ -0.54
CDH1-214ENST00000621016 ZNF76P36508 570 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 KLHL30Q0D2K2 578 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 TUBB2AQ13885 445 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 MEA1Q16626 185 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 PAPD7Q5XG87 772 aaKnown RBP11.68□□□□□ -0.54
CDH1-214ENST00000621016 CDCA2Q69YH5 1023 aaPredicted RBP11.68□□□□□ -0.54
CDH1-214ENST00000621016 CCNI2Q6ZMN8 369 aaPredicted RBP11.68□□□□□ -0.54
CDH1-214ENST00000621016 BZW1Q7L1Q6 419 aaKnown RBP11.68□□□□□ -0.54
CDH1-214ENST00000621016 CCDC170Q8IYT3 715 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 KRT12Q99456 494 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 TUBB2BQ9BVA1 445 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 NFU1Q9UMS0 254 aa11.68□□□□□ -0.54
CDH1-214ENST00000621016 CNTNAP4Q9C0A0 1308 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 MAFGO15525 162 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 TTLL1O95922 423 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 KRT14P02533 472 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 PLA2G4BP0C869 781 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 PLCG2P16885 1265 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 FUT4P22083 530 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 FECHP22830 423 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 LLGL1Q15334 1064 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 SPRED3Q2MJR0 410 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 SFMBT2Q5VUG0 894 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 DAGLBQ8NCG7 672 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 PIGOQ8TEQ8 1089 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 HAS1Q92839 578 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 MTMR9Q96QG7 549 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 SH2D4AQ9H788 454 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 PAPOLBQ9NRJ5 636 aaKnown RBP11.67□□□□□ -0.54
CDH1-214ENST00000621016 SCAF8Q9UPN6 1271 aaKnown RBP11.67□□□□□ -0.54
CDH1-214ENST00000621016 SIK3Q9Y2K2 1263 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 CASP5P51878 434 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 POLE2P56282 527 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 FKBP3Q00688 224 aaKnown RBP11.67□□□□□ -0.54
CDH1-214ENST00000621016 SLC9C1Q4G0N8 1177 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 LRRC23Q53EV4 343 aaPredicted RBP11.67□□□□□ -0.54
CDH1-214ENST00000621016 GJB7Q6PEY0 223 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 BARGINQ6ZT62 677 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 TIAM2Q8IVF5 1701 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 CERS5Q8N5B7 392 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 RBM17Q96I25 401 aaKnown RBP11.67□□□□□ -0.54
CDH1-214ENST00000621016 NOX5Q96PH1 765 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 CUEDC2Q9H467 287 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 EPB41L5Q9HCM4 733 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 LNPEPQ9UIQ6 1025 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 COL4A3BPQ9Y5P4 624 aa11.67□□□□□ -0.54
CDH1-214ENST00000621016 A0A087X0T9 212 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 EDIL3O43854 480 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms