RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TELO2Q9Y4R8 837 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 TRIM17Q9Y577 477 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 MYH7BA7E2Y1 1941 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 TCHHQ07283 1943 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 A0A087WWV3 80 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 E9PMD0 336 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 DYNC1LI2O43237 492 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-209ENST00000620393 PPFIA4O75335 1185 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 LGR5O75473 907 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 PLA2G4BP0C869 781 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 HOXB3P14651 431 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-209ENST00000620393 ELNP15502 786 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 PSMC6P62333 389 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 AMPD3Q01432 767 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 SP4Q02446 784 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 CYP4A11Q02928 519 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 TRIM32Q13049 653 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 HSDL1Q3SXM5 330 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 GJC2Q5T442 439 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-209ENST00000620393 MAP3K21Q5TCX8 1036 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 TMEM92Q6UXU6 159 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 SV2BQ7L1I2 683 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 SYT2Q8N9I0 419 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-209ENST00000620393 BANK1Q8NDB2 785 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 PCYT2Q99447 389 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 MTRQ99707 1265 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 LXNQ9BS40 222 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 TNMDQ9H2S6 317 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 MAGEF1Q9HAY2 307 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 WRAP73Q9P2S5 460 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-209ENST00000620393 GABBR1Q9UBS5 961 aa8.97□□□□□ -0.97
CPNE3-209ENST00000620393 MAFBQ9Y5Q3 323 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-209ENST00000620393 NOP56O00567 594 aaKnown RBP8.96□□□□□ -0.98
CPNE3-209ENST00000620393 BACH1O14867 736 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 ZBTB39O15060 712 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 FOXN1O15353 648 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 SEPT4O43236 478 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 ADCY6O43306 1168 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 GTPBP6O43824 516 aaPredicted RBP8.96□□□□□ -0.98
CPNE3-209ENST00000620393 ZNF862O60290 1169 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 DUSP11O75319 330 aaKnown RBP8.96□□□□□ -0.98
CPNE3-209ENST00000620393 STBD1O95210 358 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 EYA4O95677 639 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 HMGCRP04035 888 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 MYL1P05976 194 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 CYBAP13498 195 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 AKR1A1P14550 325 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 PTGS1P23219 599 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 AFMP43652 599 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 STAT5BP51692 787 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 MCM6Q14566 821 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 POSTNQ15063 836 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 FAM160B1Q5W0V3 765 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 RBM43Q6ZSC3 357 aaKnown RBP8.96□□□□□ -0.98
CPNE3-209ENST00000620393 OTUD6AQ7L8S5 288 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 PLPPR4Q7Z2D5 763 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 CCDC60Q8IWA6 550 aaPredicted RBP8.96□□□□□ -0.98
CPNE3-209ENST00000620393 HS6ST3Q8IZP7 471 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 OR6J1Q8NGC5 347 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 PPTC7Q8NI37 304 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 AFAP1L1Q8TED9 768 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 PIGOQ8TEQ8 1089 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 AFG1LQ8WV93 481 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 LARP4BQ92615 738 aaKnown RBP8.96□□□□□ -0.98
CPNE3-209ENST00000620393 STAMQ92783 540 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 ATP6V0A1Q93050 837 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 C7orf25Q9BPX7 421 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 LRRC27Q9C0I9 530 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 AP5M1Q9H0R1 490 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 SMARCAD1Q9H4L7 1026 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 ZNF302Q9NR11 478 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 ANKEF1Q9NU02 776 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 KIAA1468Q9P260 1216 aa8.96□□□□□ -0.98
CPNE3-209ENST00000620393 DBR1Q9UK59 544 aaKnown RBP8.96□□□□□ -0.98
CPNE3-209ENST00000620393 THSD7BQ9C0I4 1608 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 A6NJR5 290 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 SMC2O95347 1197 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 HSPA8P11142 646 aaKnown RBP8.95□□□□□ -0.98
CPNE3-209ENST00000620393 HOXD8P13378 290 aaPredicted RBP8.95□□□□□ -0.98
CPNE3-209ENST00000620393 ATP4AP20648 1035 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 CNGA1P29973 690 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 YWHABP31946 246 aaKnown RBP8.95□□□□□ -0.98
CPNE3-209ENST00000620393 GRK4P32298 578 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 TCF7P36402 384 aaPredicted RBP8.95□□□□□ -0.98
CPNE3-209ENST00000620393 SARSP49591 514 aaKnown RBP8.95□□□□□ -0.98
CPNE3-209ENST00000620393 SLC26A2P50443 739 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 SLC12A3P55017 1021 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 NKX3-2P78367 333 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 PNOCQ13519 176 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 DHX8Q14562 1220 aaKnown RBP8.95□□□□□ -0.98
CPNE3-209ENST00000620393 UGCGQ16739 394 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 ZSCAN23Q3MJ62 389 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 XKR3Q5GH77 459 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 UTP14CQ5TAP6 766 aaKnown RBP8.95□□□□□ -0.98
CPNE3-209ENST00000620393 CNNM4Q6P4Q7 775 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 CKAP2LQ8IYA6 745 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 GRAMD1CQ8IYS0 662 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 SPATA20Q8TB22 786 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 NIFKQ9BYG3 293 aaKnown RBP8.95□□□□□ -0.98
CPNE3-209ENST00000620393 GZF1Q9H116 711 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms